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Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECOR38
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Top 29 experiments (either direction), sorted by average fitness
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500 nt
sstT and alx are separated by 615 nucleotides
alx and ygjR are separated by 282 nucleotides
ygjR and ygjQ are separated by 78 nucleotides
ygjQ and ygjP are separated by 76 nucleotides
HEPCGN_17390: sstT - serine/threonine transporter SstT, at 2,222,358 to 2,223,602
sstT
HEPCGN_17395: alx - TerC family membrane protein Alx, at 2,224,218 to 2,225,183
alx
HEPCGN_17400: ygjR - Uncharacterized oxidoreductase YgjR, at 2,225,466 to 2,226,452
ygjR
HEPCGN_17405: ygjQ - Uncharacterized protein YgjQ, at 2,226,531 to 2,227,214
ygjQ
HEPCGN_17410: ygjP - UTP pyrophosphatase, at 2,227,291 to 2,227,794
ygjP
Group
Condition
HEPCGN
_17390
HEPCGN
_17395
HEPCGN
_17400
HEPCGN
_17405
HEPCGN
_17410
sstT
alx
ygjR
ygjQ
ygjP
phage
Bas48
-0.2
-0.4
-0.0
-0.3
-0.1
phage
Bas38
-0.1
-0.2
-0.2
-0.0
-0.0
phage
Bas39
-0.2
-0.1
-0.0
-0.1
+0.0
no phage control
Control_ECOR38
-0.1
-0.1
-0.1
+0.1
-0.1
phage
RB68
+0.0
-0.1
-0.1
-0.1
-0.1
phage
RB23
+0.1
+0.1
-0.1
-0.2
-0.2
phage
TP7
-0.2
-0.2
-0.2
+0.2
-0.0
phage
Phi92
+0.2
+0.2
-0.3
-0.2
-0.2
phage
Bas39
-0.1
+0.1
-0.1
-0.0
-0.0
carbon source
Casamino-acids
-0.1
+0.0
+0.0
-0.0
-0.2
carbon source
D-Glucose
-0.0
+0.0
+0.0
-0.0
-0.2
phage
Bas38
-0.0
-0.0
+0.0
-0.0
-0.1
carbon source
Sodium-DL-Lactate
+0.0
-0.1
-0.0
+0.2
-0.1
carbon source
Casamino-acids
-0.1
+0.2
-0.0
+0.0
-0.1
phage
Bas55
+0.0
-0.2
+0.2
-0.0
-0.0
phage
Bas51
-0.0
-0.1
-0.0
+0.2
-0.0
phage
Bas19
+0.0
+0.0
+0.1
-0.1
+0.0
carbon source
L-Arabinose
+0.1
+0.2
+0.0
-0.1
-0.1
phage
TP7
+0.2
-0.2
+0.1
-0.3
+0.3
phage
K20
+0.1
+0.1
+0.1
-0.1
-0.0
phage
Phi92
+0.0
+0.6
-0.1
-0.4
+0.0
phage
Bas55
-0.0
-0.0
+0.1
+0.0
+0.0
no phage control
Control_ECOR38
+0.2
+0.1
+0.1
+0.1
-0.2
phage
RB23
-0.1
+0.1
+0.0
+0.1
+0.1
carbon source
L-Arabinose
+0.1
+0.2
+0.0
-0.0
+0.1
phage
Bas48
+0.2
+0.1
+0.3
-0.2
+0.0
carbon source
Sodium-DL-Lactate
+0.1
+0.1
+0.1
-0.0
-0.0
phage
Bas19
+0.0
+0.3
+0.0
+0.0
-0.0
phage
K20
+0.1
+0.1
+0.0
+0.1
-0.0
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