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Cofit
Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECOR38
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500 nt
yhaJ and yhaI are separated by 50 nucleotides
yhaI and yhaH are separated by 241 nucleotides
yhaH and yqjG are separated by 292 nucleotides
yqjG and yqjF are separated by 69 nucleotides
HEPCGN_17285: yhaJ - DNA-binding transcriptional regulator YhaJ, at 2,203,968 to 2,204,864
yhaJ
HEPCGN_17290: yhaI - Inner membrane protein YhaI, at 2,204,915 to 2,205,271
yhaI
HEPCGN_17295: yhaH - Inner membrane protein YhaH, at 2,205,513 to 2,205,878
yhaH
HEPCGN_17300: yqjG - glutathionyl-hydroquinone reductase YqjG, at 2,206,171 to 2,207,157
yqjG
HEPCGN_17305: yqjF - Inner membrane protein YqjF, at 2,207,227 to 2,207,709
yqjF
Group
Condition
HEPCGN
_17285
HEPCGN
_17290
HEPCGN
_17295
HEPCGN
_17300
HEPCGN
_17305
yhaJ
yhaI
yhaH
yqjG
yqjF
phage
Bas48
+0.5
-1.1
+0.2
+0.2
-0.7
phage
RB23
+0.0
-0.8
+0.3
+0.0
-0.2
phage
Bas19
-0.1
-0.1
+0.2
-0.2
-0.4
carbon source
Casamino-acids
+0.3
+0.1
-0.7
-0.0
-0.2
phage
RB23
+0.3
-0.7
-0.0
+0.0
-0.1
phage
RB68
-0.1
-0.6
+0.1
+0.3
-0.2
phage
Bas38
-0.1
-0.1
-0.2
-0.0
+0.0
phage
Bas19
+0.0
-0.4
-0.0
+0.0
+0.0
carbon source
D-Glucose
+0.2
-0.1
-0.3
+0.2
-0.2
phage
TP7
+0.2
-0.3
-0.0
+0.2
-0.3
phage
K20
-0.1
-0.7
+0.5
+0.2
-0.2
phage
Phi92
-0.2
-0.2
-0.3
-0.1
+0.6
phage
Bas55
-0.0
+0.6
-0.4
+0.0
-0.4
carbon source
Sodium-DL-Lactate
-0.0
+0.1
+0.0
-0.1
-0.2
phage
Bas48
+0.1
-0.2
-0.0
-0.1
+0.0
phage
Bas38
+0.1
-0.0
-0.4
+0.1
+0.1
phage
Bas55
-0.2
+0.1
+0.1
+0.1
-0.3
phage
Phi92
-0.2
+0.9
-0.6
-0.2
-0.0
no phage control
Control_ECOR38
+0.2
+0.1
-0.4
-0.1
-0.0
phage
Bas51
-0.3
-0.5
+0.2
-0.0
+0.4
phage
K20
+0.1
+0.1
-0.4
+0.1
-0.0
phage
Bas39
-0.2
-0.2
+0.1
+0.1
+0.3
phage
TP7
-0.1
-0.1
-0.1
+0.4
+0.1
phage
Bas39
+0.3
-0.1
-0.2
+0.0
+0.3
carbon source
L-Arabinose
+0.0
+0.3
-0.1
+0.0
+0.1
no phage control
Control_ECOR38
+0.0
+0.1
+0.5
-0.1
+0.1
carbon source
Sodium-DL-Lactate
+0.1
+0.1
+0.1
+0.2
+0.2
carbon source
Casamino-acids
+0.2
+0.4
+0.1
-0.1
+0.1
carbon source
L-Arabinose
+0.1
+0.8
+0.4
+0.0
-0.2
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