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Cofit
Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECOR38
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500 nt
yhaK and yhaJ are separated by 104 nucleotides
yhaJ and yhaI are separated by 50 nucleotides
yhaI and yhaH are separated by 241 nucleotides
yhaH and yqjG are separated by 292 nucleotides
HEPCGN_17280: yhaK - Pirin-like protein YhaK, at 2,203,162 to 2,203,863
yhaK
HEPCGN_17285: yhaJ - DNA-binding transcriptional regulator YhaJ, at 2,203,968 to 2,204,864
yhaJ
HEPCGN_17290: yhaI - Inner membrane protein YhaI, at 2,204,915 to 2,205,271
yhaI
HEPCGN_17295: yhaH - Inner membrane protein YhaH, at 2,205,513 to 2,205,878
yhaH
HEPCGN_17300: yqjG - glutathionyl-hydroquinone reductase YqjG, at 2,206,171 to 2,207,157
yqjG
Group
Condition
HEPCGN
_17280
HEPCGN
_17285
HEPCGN
_17290
HEPCGN
_17295
HEPCGN
_17300
yhaK
yhaJ
yhaI
yhaH
yqjG
phage
Phi92
-1.1
-0.2
-0.2
-0.3
-0.1
phage
RB68
-0.5
-0.1
-0.6
+0.1
+0.3
phage
Bas48
-0.6
+0.5
-1.1
+0.2
+0.2
phage
Bas19
-0.3
+0.0
-0.4
-0.0
+0.0
phage
K20
-0.6
-0.1
-0.7
+0.5
+0.2
carbon source
Casamino-acids
-0.2
+0.3
+0.1
-0.7
-0.0
phage
RB23
+0.1
+0.0
-0.8
+0.3
+0.0
phage
Bas51
+0.1
-0.3
-0.5
+0.2
-0.0
phage
RB23
+0.0
+0.3
-0.7
-0.0
+0.0
phage
Bas38
-0.1
+0.1
-0.0
-0.4
+0.1
carbon source
D-Glucose
-0.2
+0.2
-0.1
-0.3
+0.2
phage
Bas48
-0.1
+0.1
-0.2
-0.0
-0.1
phage
TP7
-0.5
-0.1
-0.1
-0.1
+0.4
phage
Bas19
-0.1
-0.1
-0.1
+0.2
-0.2
phage
Bas38
+0.1
-0.1
-0.1
-0.2
-0.0
phage
Bas39
+0.1
-0.2
-0.2
+0.1
+0.1
phage
Bas55
-0.3
-0.2
+0.1
+0.1
+0.1
phage
K20
-0.1
+0.1
+0.1
-0.4
+0.1
carbon source
L-Arabinose
-0.3
+0.0
+0.3
-0.1
+0.0
phage
Phi92
+0.1
-0.2
+0.9
-0.6
-0.2
carbon source
Sodium-DL-Lactate
-0.0
-0.0
+0.1
+0.0
-0.1
no phage control
Control_ECOR38
+0.1
+0.2
+0.1
-0.4
-0.1
phage
Bas39
+0.0
+0.3
-0.1
-0.2
+0.0
phage
Bas55
-0.1
-0.0
+0.6
-0.4
+0.0
phage
TP7
+0.2
+0.2
-0.3
-0.0
+0.2
no phage control
Control_ECOR38
+0.1
+0.0
+0.1
+0.5
-0.1
carbon source
Sodium-DL-Lactate
+0.2
+0.1
+0.1
+0.1
+0.2
carbon source
Casamino-acids
+0.2
+0.2
+0.4
+0.1
-0.1
carbon source
L-Arabinose
+0.1
+0.1
+0.8
+0.4
+0.0
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