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Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECOR38
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500 nt
nusA and infB are separated by 24 nucleotides
infB and rbfA are separated by 163 nucleotides
rbfA and truB overlap by 1 nucleotides
truB and rpsO are separated by 148 nucleotides
HEPCGN_16980: nusA - Transcription termination/antitermination protein NusA, at 2,144,317 to 2,145,804
nusA
HEPCGN_16985: infB - Translation initiation factor IF-2, at 2,145,829 to 2,148,501
infB
HEPCGN_16995: rbfA - 30S ribosome-binding factor RbfA, at 2,148,665 to 2,149,066
rbfA
HEPCGN_17000: truB - tRNA pseudouridine(55) synthase TruB, at 2,149,066 to 2,150,010
truB
HEPCGN_17005: rpsO - 30S ribosomal protein S15, at 2,150,159 to 2,150,428
rpsO
Group
Condition
HEPCGN
_16980
HEPCGN
_16985
HEPCGN
_16995
HEPCGN
_17000
HEPCGN
_17005
nusA
infB
rbfA
truB
rpsO
phage
TP7
N.D.
N.D.
N.D.
-1.9
N.D.
phage
TP7
N.D.
N.D.
N.D.
-1.8
N.D.
phage
Bas19
N.D.
N.D.
N.D.
-1.3
N.D.
phage
RB23
N.D.
N.D.
N.D.
-0.9
N.D.
phage
Bas19
N.D.
N.D.
N.D.
-0.9
N.D.
phage
Bas48
N.D.
N.D.
N.D.
-0.7
N.D.
phage
Bas48
N.D.
N.D.
N.D.
-0.7
N.D.
phage
RB23
N.D.
N.D.
N.D.
-0.5
N.D.
phage
Bas38
N.D.
N.D.
N.D.
-0.3
N.D.
phage
Bas55
N.D.
N.D.
N.D.
-0.3
N.D.
phage
RB68
N.D.
N.D.
N.D.
-0.3
N.D.
no phage control
Control_ECOR38
N.D.
N.D.
N.D.
-0.3
N.D.
carbon source
D-Glucose
N.D.
N.D.
N.D.
-0.2
N.D.
phage
K20
N.D.
N.D.
N.D.
-0.1
N.D.
phage
Bas55
N.D.
N.D.
N.D.
-0.1
N.D.
carbon source
L-Arabinose
N.D.
N.D.
N.D.
-0.1
N.D.
phage
Bas39
N.D.
N.D.
N.D.
-0.1
N.D.
phage
Bas51
N.D.
N.D.
N.D.
-0.1
N.D.
carbon source
Casamino-acids
N.D.
N.D.
N.D.
-0.1
N.D.
phage
Bas38
N.D.
N.D.
N.D.
-0.1
N.D.
no phage control
Control_ECOR38
N.D.
N.D.
N.D.
-0.0
N.D.
carbon source
Sodium-DL-Lactate
N.D.
N.D.
N.D.
-0.0
N.D.
carbon source
L-Arabinose
N.D.
N.D.
N.D.
+0.0
N.D.
phage
Bas39
N.D.
N.D.
N.D.
+0.0
N.D.
phage
K20
N.D.
N.D.
N.D.
+0.0
N.D.
carbon source
Casamino-acids
N.D.
N.D.
N.D.
+0.2
N.D.
carbon source
Sodium-DL-Lactate
N.D.
N.D.
N.D.
+0.3
N.D.
phage
Phi92
N.D.
N.D.
N.D.
+2.7
N.D.
phage
Phi92
N.D.
N.D.
N.D.
+2.8
N.D.
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