Fitness for 5 genes in Escherichia coli ECOR38

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500 ntlptA and lptC overlap by 32 nucleotideslptC and kdsC overlap by 4 nucleotideskdsC and kdsD are separated by 20 nucleotideskdsD and yrbG are separated by 13 nucleotides HEPCGN_16825: lptA - lipopolysaccharide ABC transporter substrate-binding protein LptA, at 2,118,051 to 2,118,608 lptA HEPCGN_16830: lptC - LPS export ABC transporter periplasmic protein LptC, at 2,118,577 to 2,119,152 lptC HEPCGN_16835: kdsC - 3-deoxy-manno-octulosonate-8-phosphatase KdsC, at 2,119,149 to 2,119,715 kdsC HEPCGN_16840: kdsD - arabinose-5-phosphate isomerase KdsD, at 2,119,736 to 2,120,722 kdsD HEPCGN_16845: yrbG - calcium/sodium antiporter, at 2,120,736 to 2,121,713 yrbG
Group Condition HEPCGN_16825 HEPCGN_16830 HEPCGN_16835 HEPCGN_16840 HEPCGN_16845
lptA lptC kdsC kdsD yrbG
phage TP7 N.D. -4.7 -5.8 +0.2 +0.4
phage Phi92 N.D. -6.0 -1.5 -0.4 +0.2
phage TP7 N.D. -3.7 -4.3 +0.4 +0.6
phage RB23 N.D. -4.1 -2.6 +0.1 +0.1
phage Bas48 N.D. -2.4 -1.7 +0.0 +0.2
phage Phi92 N.D. -2.8 -1.1 -0.0 +0.0
phage Bas48 N.D. -2.1 -1.8 -0.0 +0.2
phage RB23 N.D. -2.9 -0.7 +0.1 +0.3
phage K20 N.D. -0.1 -1.9 -0.2 +0.1
phage Bas19 N.D. -1.5 -0.2 -0.0 -0.1
phage Bas19 N.D. -0.3 -0.8 -0.3 -0.2
phage Bas55 N.D. -1.0 -0.7 +0.0 +0.1
phage Bas55 N.D. -1.2 -0.3 -0.1 +0.2
phage RB68 N.D. +0.2 -1.3 -0.0 -0.0
phage Bas51 N.D. -0.2 -0.4 -0.2 -0.0
phage Bas38 N.D. -0.3 -0.1 -0.4 +0.0
phage Bas39 N.D. -0.1 -0.7 +0.1 +0.1
phage Bas39 N.D. -0.2 -0.4 -0.1 +0.2
no phage control Control_ECOR38 N.D. -0.1 -0.6 +0.1 +0.1
carbon source Casamino-acids N.D. -0.2 -0.3 -0.0 +0.2
no phage control Control_ECOR38 N.D. +0.1 -0.4 -0.3 +0.2
carbon source Casamino-acids N.D. -0.4 -0.1 -0.0 +0.2
carbon source Sodium-DL-Lactate N.D. -0.4 -0.0 +0.1 +0.0
carbon source L-Arabinose N.D. +0.1 -0.3 -0.2 +0.2
phage Bas38 N.D. +0.2 -0.2 -0.1 -0.0
carbon source L-Arabinose N.D. +0.5 -0.5 -0.2 +0.0
carbon source D-Glucose N.D. +0.1 -0.1 -0.0 -0.0
phage K20 N.D. -0.1 +0.2 -0.0 +0.1
carbon source Sodium-DL-Lactate N.D. +0.0 +0.6 -0.0 +0.1
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