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Protein
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Fitness for 5 genes in
Escherichia coli ECOR38
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500 nt
HEPCGN_16475 and acrE are separated by 11 nucleotides
acrE and acrS are separated by 398 nucleotides
acrS and yhdU are separated by 2 nucleotides
yhdU and yhdJ are separated by 83 nucleotides
HEPCGN_16475: HEPCGN_16475 - Putative integral transmembrane protein, at 2,042,510 to 2,043,442
_16475
HEPCGN_16480: acrE - multidrug efflux RND transporter periplasmic adaptor subunit AcrE, at 2,043,454 to 2,044,611
acrE
HEPCGN_16485: acrS - multidrug efflux transporter transcriptional repressor AcrS, at 2,045,010 to 2,045,672
acrS
HEPCGN_16490: yhdU - Inner membrane protein YhdU, at 2,045,675 to 2,045,854
yhdU
HEPCGN_16495: yhdJ - adenine-specific DNA-methyltransferase, at 2,045,938 to 2,046,822
yhdJ
Group
Condition
HEPCGN
_16475
HEPCGN
_16480
HEPCGN
_16485
HEPCGN
_16490
HEPCGN
_16495
acrE
acrS
yhdU
yhdJ
carbon source
Casamino-acids
-0.1
-0.0
-0.0
-2.0
+0.2
phage
Phi92
-0.2
-0.2
-0.4
-0.3
+0.1
carbon source
Sodium-DL-Lactate
+0.2
-0.1
-0.0
-0.8
-0.2
carbon source
D-Glucose
+0.2
-0.0
+0.2
-1.3
+0.2
no phage control
Control_ECOR38
-0.1
-0.2
-0.3
-0.1
-0.0
phage
Bas48
-0.0
+0.0
-0.0
-0.4
-0.1
phage
Bas51
+0.2
+0.1
+0.3
-0.8
-0.2
phage
Bas38
+0.1
+0.1
-0.0
-0.5
-0.0
phage
Phi92
-0.0
+0.1
-0.2
-0.1
-0.2
phage
Bas19
-0.1
-0.0
-0.3
+0.5
-0.3
phage
Bas38
-0.1
-0.1
-0.0
-0.0
+0.0
phage
TP7
-0.0
-0.1
-0.4
+0.4
-0.1
carbon source
Casamino-acids
-0.0
-0.1
+0.1
-0.2
+0.1
phage
Bas55
-0.2
-0.2
-0.2
+0.5
-0.0
phage
K20
-0.1
-0.1
-0.2
+0.3
+0.1
phage
Bas48
-0.2
+0.2
-0.2
+0.3
-0.2
carbon source
L-Arabinose
+0.0
-0.1
-0.1
-0.0
+0.1
phage
TP7
-0.2
-0.1
-0.1
+0.5
+0.0
phage
RB23
-0.1
+0.1
+0.1
-0.1
+0.1
phage
Bas19
+0.0
-0.2
-0.1
+0.3
+0.1
phage
RB68
-0.0
+0.1
-0.1
+0.0
+0.2
no phage control
Control_ECOR38
-0.0
+0.0
+0.2
+0.1
-0.0
phage
Bas39
+0.1
-0.3
+0.1
+0.4
+0.0
carbon source
L-Arabinose
+0.1
-0.0
-0.0
+0.2
+0.1
carbon source
Sodium-DL-Lactate
+0.1
-0.1
+0.1
+0.2
+0.1
phage
Bas55
-0.3
+0.1
-0.0
+0.6
+0.2
phage
Bas39
+0.1
+0.0
-0.1
+0.4
+0.2
phage
RB23
-0.0
+0.0
+0.1
+0.6
-0.1
phage
K20
-0.0
+0.1
+0.0
+0.5
+0.2
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