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Cofit
Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECOR38
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Top 29 experiments (either direction), sorted by average fitness
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500 nt
feoC and feoB overlap by 1 nucleotides
feoB and feoA are separated by 16 nucleotides
feoA and yhgF are separated by 437 nucleotides
yhgF and greB are separated by 96 nucleotides
HEPCGN_15820: feoC - [Fe-S]-dependent transcriptional repressor FeoC, at 1,935,359 to 1,935,595
feoC
HEPCGN_15825: feoB - ferrous iron transport protein B, at 1,935,595 to 1,937,916
feoB
HEPCGN_15830: feoA - ferrous iron transporter A, at 1,937,933 to 1,938,160
feoA
HEPCGN_15835: yhgF - Protein YhgF, at 1,938,598 to 1,940,919
yhgF
HEPCGN_15840: greB - transcription elongation factor GreB, at 1,941,016 to 1,941,492
greB
Group
Condition
HEPCGN
_15820
HEPCGN
_15825
HEPCGN
_15830
HEPCGN
_15835
HEPCGN
_15840
feoC
feoB
feoA
yhgF
greB
phage
TP7
N.D.
-0.3
-0.5
-0.4
-1.2
phage
TP7
N.D.
-0.7
+0.1
-0.3
-1.4
phage
Bas48
N.D.
-0.2
-0.5
-0.3
-0.7
phage
Bas48
N.D.
-0.0
-0.3
-0.0
-0.9
phage
Bas19
N.D.
-0.2
-0.4
-0.3
-0.3
phage
Bas51
N.D.
-0.1
-0.7
-0.2
-0.1
phage
RB23
N.D.
-0.3
-0.2
-0.0
-0.5
phage
Bas19
N.D.
-0.3
-0.3
-0.0
-0.4
phage
RB23
N.D.
-0.2
-0.2
+0.0
-0.2
carbon source
Casamino-acids
N.D.
+0.0
-0.4
-0.1
-0.1
phage
Bas39
N.D.
-0.1
-0.3
-0.1
+0.0
phage
Bas55
N.D.
-0.0
-0.0
-0.0
-0.3
phage
K20
N.D.
+0.0
-0.6
-0.1
+0.2
phage
Bas38
N.D.
-0.0
-0.1
-0.2
+0.0
carbon source
Sodium-DL-Lactate
N.D.
+0.1
+0.0
-0.2
-0.3
carbon source
Casamino-acids
N.D.
-0.1
+0.1
-0.2
-0.1
no phage control
Control_ECOR38
N.D.
+0.0
-0.4
-0.0
+0.2
phage
K20
N.D.
-0.1
-0.1
-0.0
+0.0
phage
Bas39
N.D.
-0.1
-0.2
+0.0
+0.2
phage
Bas55
N.D.
+0.1
+0.1
+0.0
-0.2
carbon source
L-Arabinose
N.D.
+0.2
-0.0
-0.0
-0.1
no phage control
Control_ECOR38
N.D.
-0.1
-0.2
+0.2
+0.1
phage
Bas38
N.D.
+0.1
-0.0
-0.1
+0.1
carbon source
D-Glucose
N.D.
+0.2
+0.3
-0.3
-0.2
carbon source
Sodium-DL-Lactate
N.D.
+0.0
+0.3
-0.0
-0.2
phage
RB68
N.D.
+0.2
-0.2
-0.1
+0.4
phage
Phi92
N.D.
+0.0
-0.0
-0.1
+0.7
carbon source
L-Arabinose
N.D.
+0.3
+0.5
-0.1
-0.0
phage
Phi92
N.D.
+0.2
+0.3
-0.4
+0.8
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