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Cofit
Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECOR38
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Top 29 experiments (either direction), sorted by average fitness
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500 nt
yhhY and yhhX are separated by 333 nucleotides
yhhX and yhhW are separated by 122 nucleotides
yhhW and gntR are separated by 223 nucleotides
gntR and gntK are separated by 138 nucleotides
HEPCGN_15640: yhhY - N-acetyltransferase, at 1,890,479 to 1,890,967
yhhY
HEPCGN_15650: yhhX - oxidoreductase, at 1,891,301 to 1,892,338
yhhX
HEPCGN_15655: yhhW - quercetin 2,3-dioxygenase, at 1,892,461 to 1,893,156
yhhW
HEPCGN_15660: gntR - gluconate operon transcriptional repressor GntR, at 1,893,380 to 1,894,375
gntR
HEPCGN_15665: gntK - gluconokinase, at 1,894,514 to 1,895,041
gntK
Group
Condition
HEPCGN
_15640
HEPCGN
_15650
HEPCGN
_15655
HEPCGN
_15660
HEPCGN
_15665
yhhY
yhhX
yhhW
gntR
gntK
phage
Phi92
-0.0
-0.1
+0.2
-0.6
-1.7
phage
Phi92
-0.4
-0.1
+0.4
-0.7
-1.0
carbon source
Sodium-DL-Lactate
-0.2
-0.1
+0.1
-0.3
-0.9
carbon source
Casamino-acids
-0.0
-0.1
-0.0
-0.2
-0.5
phage
K20
-0.0
-0.1
-0.4
+0.1
-0.6
phage
RB23
+0.2
-0.1
-0.1
-0.1
-0.6
phage
RB23
-0.0
+0.1
-0.1
-0.1
-0.4
phage
Bas51
-0.0
+0.1
+0.1
-0.4
-0.3
phage
Bas19
+0.1
-0.0
-0.3
-0.1
-0.0
phage
RB68
+0.1
+0.2
-0.0
-0.1
-0.5
phage
Bas39
-0.1
-0.1
+0.0
-0.2
-0.0
phage
Bas39
+0.0
-0.0
+0.4
-0.4
-0.4
phage
Bas38
+0.0
-0.1
+0.2
-0.3
-0.2
phage
Bas48
-0.0
-0.1
+0.0
-0.3
+0.1
carbon source
Casamino-acids
+0.1
+0.1
+0.2
-0.3
-0.4
carbon source
L-Arabinose
-0.3
-0.3
+0.3
-0.2
+0.2
phage
TP7
+0.3
-0.3
-0.2
-0.1
-0.0
carbon source
Sodium-DL-Lactate
+0.2
-0.2
-0.1
-0.1
+0.2
phage
K20
+0.2
+0.3
-0.3
-0.2
-0.2
phage
Bas55
-0.0
-0.0
-0.3
+0.1
+0.1
phage
Bas38
+0.1
+0.3
-0.0
-0.1
-0.3
phage
Bas48
-0.0
+0.0
+0.1
+0.0
-0.0
phage
Bas19
+0.0
+0.0
-0.0
+0.0
-0.1
carbon source
D-Glucose
-0.1
+0.0
+0.3
+0.0
+0.0
phage
Bas55
+0.2
+0.1
+0.1
+0.2
-0.3
carbon source
L-Arabinose
+0.1
+0.1
-0.2
+0.2
+0.0
no phage control
Control_ECOR38
+0.2
+0.2
+0.2
-0.2
+0.1
phage
TP7
-0.0
+0.1
-0.2
-0.1
+0.9
no phage control
Control_ECOR38
-0.0
+0.0
+0.3
-0.2
+0.5
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