Fitness for 5 genes in Escherichia coli ECOR38

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500 ntrpoH and livJ are separated by 271 nucleotideslivJ and panM are separated by 187 nucleotidespanM and livK are separated by 423 nucleotideslivK and livH are separated by 47 nucleotides HEPCGN_15545: rpoH - RNA polymerase sigma factor RpoH, at 1,871,271 to 1,872,125 rpoH HEPCGN_15550: livJ - branched chain amino acid ABC transporter substrate-binding protein LivJ, at 1,872,397 to 1,873,500 livJ HEPCGN_15555: panM - aspartate 1-decarboxylase autocleavage activator PanM, at 1,873,688 to 1,874,071 panM HEPCGN_15560: livK - high-affinity branched-chain amino acid ABC transporter substrate-binding protein LivK, at 1,874,495 to 1,875,604 livK HEPCGN_15565: livH - high-affinity branched-chain amino acid ABC transporter permease LivH, at 1,875,652 to 1,876,578 livH
Group Condition HEPCGN_15545 HEPCGN_15550 HEPCGN_15555 HEPCGN_15560 HEPCGN_15565
rpoH livJ panM livK livH
carbon source D-Glucose N.D. +0.2 -1.9 -0.2 +0.2
carbon source Casamino-acids N.D. -0.0 -1.2 +0.1 +0.0
carbon source Casamino-acids N.D. +0.2 -1.1 -0.1 +0.0
phage TP7 N.D. -0.3 -0.6 +0.1 -0.0
carbon source L-Arabinose N.D. -0.0 -0.5 -0.0 -0.3
phage Phi92 N.D. -0.1 -0.5 -0.3 +0.1
carbon source Sodium-DL-Lactate N.D. -0.3 -0.5 +0.1 -0.0
phage Bas19 N.D. +0.1 -0.7 -0.1 +0.0
phage K20 N.D. -0.5 -0.1 +0.1 -0.1
phage RB23 N.D. -0.5 +0.3 -0.1 +0.0
no phage control Control_ECOR38 N.D. -0.2 -0.2 -0.0 +0.1
phage Bas39 N.D. -0.2 -0.2 +0.0 +0.0
phage Bas55 N.D. -0.3 -0.1 +0.0 +0.2
phage Bas51 N.D. -0.1 +0.0 -0.1 +0.1
carbon source Sodium-DL-Lactate N.D. +0.2 -0.4 -0.0 +0.1
phage Bas48 N.D. +0.1 -0.2 -0.0 -0.1
phage Bas19 N.D. -0.3 +0.2 -0.0 -0.1
phage Phi92 N.D. +0.1 +0.2 -0.2 -0.3
phage Bas48 N.D. +0.0 +0.1 -0.1 -0.2
phage Bas38 N.D. -0.1 +0.2 -0.1 -0.0
carbon source L-Arabinose N.D. +0.0 +0.1 -0.1 -0.1
phage Bas39 N.D. -0.1 +0.1 -0.1 +0.1
phage TP7 N.D. -0.2 +0.1 +0.2 -0.0
phage Bas55 N.D. -0.1 +0.4 -0.0 -0.3
no phage control Control_ECOR38 N.D. -0.1 +0.2 -0.1 +0.1
phage Bas38 N.D. -0.0 +0.1 -0.0 +0.0
phage RB68 N.D. -0.0 +0.4 +0.1 -0.0
phage RB23 N.D. -0.0 +0.2 +0.2 +0.2
phage K20 N.D. -0.3 +0.5 +0.1 +0.2
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