Private Fitness
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECOR38
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 29 experiments (either direction), sorted by average fitness
Or view
all 29 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
mngR and nikE are separated by 198 nucleotides
nikE and nikE are separated by 4 nucleotides
nikE and nikD overlap by 4 nucleotides
nikD and nikC overlap by 1 nucleotides
HEPCGN_15440: mngR - GntR family transcriptional regulator, at 1,852,127 to 1,852,873
mngR
HEPCGN_15445: nikE - nickel import ATP-binding protein NikE, at 1,853,072 to 1,853,473
nikE
HEPCGN_15450: nikE - nickel import ATP-binding protein NikE, at 1,853,478 to 1,854,284
nikE
HEPCGN_15455: nikD - nickel import ATP-binding protein NikD, at 1,854,281 to 1,855,045
nikD
HEPCGN_15460: nikC - nickel ABC transporter permease subunit NikC, at 1,855,045 to 1,855,878
nikC
Group
Condition
HEPCGN
_15440
HEPCGN
_15445
HEPCGN
_15450
HEPCGN
_15455
HEPCGN
_15460
mngR
nikE
nikE
nikD
nikC
phage
Bas19
-0.3
-0.1
-0.0
-0.4
-0.4
phage
TP7
-0.7
-0.4
+0.1
+0.0
-0.1
carbon source
Sodium-DL-Lactate
-0.9
+0.1
-0.1
-0.4
+0.3
phage
Bas39
-0.5
-0.1
-0.1
-0.4
+0.2
carbon source
L-Arabinose
-0.5
-0.3
-0.0
+0.2
-0.1
carbon source
D-Glucose
-0.0
+0.0
+0.1
-0.6
-0.1
phage
Bas38
-0.3
-0.2
-0.0
+0.0
-0.0
phage
RB23
+0.7
-0.2
+0.1
-0.8
-0.2
phage
Bas19
-0.2
-0.3
-0.1
+0.0
+0.1
no phage control
Control_ECOR38
+0.0
-0.1
-0.0
-0.3
-0.1
no phage control
Control_ECOR38
-0.2
-0.0
+0.0
-0.3
+0.2
phage
Bas51
-0.3
-0.3
+0.1
+0.1
+0.2
phage
Bas38
+0.2
+0.1
-0.0
-0.3
-0.1
phage
Bas48
+0.1
-0.5
+0.2
+0.4
-0.2
carbon source
Casamino-acids
+0.1
-0.2
-0.2
+0.0
+0.1
carbon source
L-Arabinose
-0.2
-0.1
+0.1
-0.3
+0.5
phage
TP7
+0.3
+0.0
-0.0
-0.4
+0.1
phage
Phi92
+0.1
-0.1
+0.2
+0.6
-0.5
carbon source
Sodium-DL-Lactate
+0.4
-0.2
-0.0
+0.3
-0.1
phage
Bas48
+0.2
+0.2
-0.1
-0.0
-0.0
carbon source
Casamino-acids
+0.2
+0.2
-0.1
-0.0
-0.0
phage
Bas55
+0.6
-0.0
-0.3
-0.0
+0.2
phage
Bas55
-0.9
+0.3
-0.0
+0.8
+0.2
phage
Phi92
+0.2
-0.1
+0.7
-0.4
-0.0
phage
K20
+0.0
+0.4
+0.3
-0.0
-0.2
phage
K20
+0.7
-0.1
+0.1
-0.2
+0.1
phage
RB68
+0.2
-0.1
+0.1
+0.4
+0.2
phage
Bas39
+0.4
+0.0
+0.0
-0.1
+0.3
phage
RB23
+0.4
-0.0
+0.3
+0.1
+0.1
remove
HEPCGN_15440
plot
remove
HEPCGN_15445
plot
remove
HEPCGN_15450
remove
HEPCGN_15455
plot
remove
HEPCGN_15460
plot