Private Fitness
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECOR38
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 29 experiments (either direction), sorted by average fitness
Or view
all 29 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
rsmJ and dtpB are separated by 48 nucleotides
dtpB and HEPCGN_15340 are separated by 165 nucleotides
HEPCGN_15340 and uspA are separated by 96 nucleotides
uspA and uspB are separated by 390 nucleotides
HEPCGN_15330: rsmJ - 16S rRNA (guanine(1516)-N(2))-methyltransferase RsmJ, at 1,827,811 to 1,828,563
rsmJ
HEPCGN_15335: dtpB - dipeptide/tripeptide permease DtpB, at 1,828,612 to 1,830,081
dtpB
HEPCGN_15340: HEPCGN_15340 - Protein YriB, at 1,830,247 to 1,830,300
_15340
HEPCGN_15345: uspA - universal stress protein UspA, at 1,830,397 to 1,830,831
uspA
HEPCGN_15350: uspB - universal stress protein UspB, at 1,831,222 to 1,831,557
uspB
Group
Condition
HEPCGN
_15330
HEPCGN
_15335
HEPCGN
_15340
HEPCGN
_15345
HEPCGN
_15350
rsmJ
dtpB
uspA
uspB
phage
Bas48
+0.1
-0.2
-1.8
+0.0
-0.1
phage
Bas48
-0.2
-0.2
-1.0
+0.2
-0.1
phage
RB23
-0.6
-0.2
-0.1
-0.2
+0.0
phage
Bas38
-0.2
-0.2
-0.3
+0.0
-0.0
phage
Bas19
-0.2
-0.1
-0.1
-0.0
-0.2
phage
RB68
-0.1
-0.1
-0.4
+0.1
-0.2
carbon source
L-Arabinose
-0.1
+0.2
-0.5
+0.0
-0.1
carbon source
Casamino-acids
-0.5
+0.1
+0.2
+0.1
-0.1
carbon source
L-Arabinose
-0.5
+0.0
+0.4
-0.1
-0.1
phage
Bas39
+0.0
-0.2
+0.2
-0.2
+0.0
phage
TP7
-0.3
-0.1
+0.0
+0.0
+0.3
phage
Phi92
+0.0
+0.0
-0.5
+0.2
+0.2
no phage control
Control_ECOR38
-0.1
+0.1
+0.1
+0.0
-0.1
phage
Phi92
-0.0
-0.2
-0.3
+0.5
+0.1
phage
Bas19
-0.2
-0.1
+0.3
+0.1
-0.1
phage
Bas55
+0.1
-0.1
+0.2
+0.1
-0.1
phage
Bas39
-0.2
+0.1
+0.3
+0.2
-0.2
no phage control
Control_ECOR38
-0.0
+0.1
+0.3
+0.0
-0.1
phage
Bas51
+0.1
+0.1
+0.2
+0.1
-0.1
phage
K20
+0.6
-0.1
-0.3
+0.1
+0.2
carbon source
Sodium-DL-Lactate
+0.1
+0.2
+0.3
+0.0
-0.1
carbon source
Sodium-DL-Lactate
+0.1
+0.4
-0.2
+0.1
+0.1
phage
Bas38
-0.0
+0.0
+0.5
+0.1
+0.0
phage
Bas55
-0.0
-0.3
+0.6
+0.3
+0.0
phage
K20
+0.2
+0.0
+0.3
+0.1
+0.1
carbon source
Casamino-acids
+0.6
-0.0
+0.3
-0.1
+0.0
phage
RB23
+0.2
-0.1
+0.6
+0.2
-0.0
phage
TP7
-0.2
-0.1
+0.6
+0.2
+0.5
carbon source
D-Glucose
+0.0
+0.2
+0.7
+0.2
-0.1
remove
HEPCGN_15330
plot
remove
HEPCGN_15335
plot
remove
HEPCGN_15340
remove
HEPCGN_15345
plot
remove
HEPCGN_15350
plot