Fitness for 5 genes in Escherichia coli ECOR38

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500 ntkdgK and pdeH are separated by 231 nucleotidespdeH and yhjG are separated by 69 nucleotidesyhjG and yhjE are separated by 178 nucleotidesyhjE and yhjD are separated by 391 nucleotides HEPCGN_15110: kdgK - 2-dehydro-3-deoxygluconokinase, at 1,781,398 to 1,782,327 kdgK HEPCGN_15115: pdeH - cyclic-guanylate-specific phosphodiesterase, at 1,782,559 to 1,783,326 pdeH HEPCGN_15120: yhjG - AsmA family protein YhjG, at 1,783,396 to 1,785,456 yhjG HEPCGN_15125: yhjE - Inner membrane metabolite transport protein YhjE, at 1,785,635 to 1,786,957 yhjE HEPCGN_15130: yhjD - inner membrane protein YhjD, at 1,787,349 to 1,788,362 yhjD
Group Condition HEPCGN_15110 HEPCGN_15115 HEPCGN_15120 HEPCGN_15125 HEPCGN_15130
kdgK pdeH yhjG yhjE yhjD
phage TP7 -0.1 -0.2 -0.2 -0.1 -0.6
phage TP7 +0.1 +0.0 +0.1 -0.1 -0.9
phage RB23 -0.1 -0.2 +0.0 +0.1 -0.3
phage RB23 -0.0 +0.1 -0.1 -0.1 -0.3
phage Bas19 +0.1 -0.1 -0.0 -0.0 -0.2
phage Bas55 +0.2 -0.5 +0.1 +0.1 -0.2
phage K20 -0.0 -0.1 +0.1 +0.1 -0.2
phage Phi92 -0.0 -0.1 +0.1 -0.1 -0.0
phage Bas48 -0.1 -0.3 +0.2 +0.2 -0.2
phage Bas55 -0.0 -0.4 +0.1 +0.0 +0.1
phage Phi92 +0.0 -0.1 +0.4 -0.1 -0.3
phage Bas48 -0.0 -0.2 -0.0 +0.2 -0.1
carbon source Casamino-acids -0.0 -0.0 +0.1 +0.1 -0.2
phage Bas39 -0.0 +0.1 -0.1 -0.1 +0.0
phage Bas51 +0.0 -0.0 -0.2 -0.0 +0.1
no phage control Control_ECOR38 -0.0 -0.2 +0.1 -0.0 +0.2
no phage control Control_ECOR38 -0.0 -0.1 -0.1 +0.1 +0.1
carbon source D-Glucose +0.0 +0.1 -0.1 +0.1 -0.1
carbon source L-Arabinose -0.0 -0.1 +0.0 +0.2 -0.0
phage Bas19 +0.1 +0.1 -0.0 +0.1 -0.1
phage Bas39 +0.0 -0.0 +0.0 +0.1 -0.0
phage Bas38 -0.1 +0.2 +0.0 -0.2 +0.2
phage RB68 +0.1 -0.1 +0.1 +0.2 -0.1
phage Bas38 +0.1 -0.2 +0.0 -0.0 +0.3
phage K20 +0.2 -0.3 +0.1 +0.1 +0.2
carbon source Sodium-DL-Lactate +0.1 +0.0 +0.1 +0.1 -0.1
carbon source Sodium-DL-Lactate -0.0 +0.1 +0.0 +0.2 +0.1
carbon source Casamino-acids +0.1 +0.3 +0.1 +0.2 -0.1
carbon source L-Arabinose +0.2 +0.1 +0.0 +0.2 +0.1
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