Fitness for 5 genes in Escherichia coli ECOR38

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500 ntrfaJ and HEPCGN_14525 are separated by 78 nucleotidesHEPCGN_14525 and HEPCGN_14530 are separated by 45 nucleotidesHEPCGN_14530 and rfaC are separated by 69 nucleotidesrfaC and rfaF are separated by 3 nucleotides HEPCGN_14520: rfaJ - UDP-galactose--(galactosyl) LPS alpha1,2-galactosyltransferase, at 1,656,991 to 1,658,019 rfaJ HEPCGN_14525: HEPCGN_14525 - beta1,3-glucosyltransferase, at 1,658,098 to 1,659,081 _14525 HEPCGN_14530: HEPCGN_14530 - O-antigen ligase domain-containing protein, at 1,659,127 to 1,660,380 _14530 HEPCGN_14535: rfaC - lipopolysaccharide heptosyltransferase RfaC, at 1,660,450 to 1,661,421 rfaC HEPCGN_14540: rfaF - ADP-heptose--LPS heptosyltransferase RfaF, at 1,661,425 to 1,662,471 rfaF
Group Condition HEPCGN_14520 HEPCGN_14525 HEPCGN_14530 HEPCGN_14535 HEPCGN_14540
rfaJ rfaC rfaF
phage Bas39 -1.5 -4.4 -4.4 N.D. -1.8
phage Bas39 -1.3 -2.8 -3.1 N.D. -3.5
carbon source L-Arabinose -0.2 -2.4 -1.3 N.D. -4.5
phage RB23 -2.0 -2.6 -2.3 N.D. -1.3
phage Bas38 -0.1 -1.6 -3.4 N.D. -2.4
phage RB23 -1.9 -2.3 -2.4 N.D. -0.5
carbon source Casamino-acids +0.1 -1.1 -0.7 N.D. -4.8
carbon source Casamino-acids +0.1 -0.8 -1.0 N.D. -3.9
phage Bas38 -0.2 -1.2 -2.1 N.D. -1.3
carbon source L-Arabinose +0.6 -0.6 -2.5 N.D. -2.3
phage Bas55 +0.1 -3.1 -0.6 N.D. -1.1
no phage control Control_ECOR38 -0.3 -0.4 -0.3 N.D. -3.3
no phage control Control_ECOR38 -0.2 -0.7 -0.9 N.D. -2.3
phage Bas55 +0.6 -3.3 -0.3 N.D. -0.9
phage Bas51 -0.1 -1.0 -0.8 N.D. -1.7
phage Bas48 +2.2 -3.5 -0.8 N.D. -1.1
carbon source Sodium-DL-Lactate +0.7 -0.2 -0.3 N.D. -3.3
carbon source Sodium-DL-Lactate +0.3 -0.2 -1.4 N.D. -1.8
carbon source D-Glucose +0.4 -0.4 -0.3 N.D. -2.6
phage RB68 -0.9 -0.8 +0.6 N.D. -1.1
phage Bas19 -0.1 -0.2 -0.4 N.D. -1.0
phage K20 +0.1 -1.0 -0.6 N.D. +0.3
phage K20 +0.1 -0.3 +0.0 N.D. -0.4
phage Bas19 +0.6 +0.8 -2.0 N.D. +0.6
phage Bas48 +2.0 -3.5 +1.7 N.D. +0.6
phage TP7 +5.3 +5.4 +4.2 N.D. +2.4
phage Phi92 +5.0 +6.2 +6.4 N.D. +2.4
phage Phi92 +5.4 +5.9 +5.2 N.D. +3.6
phage TP7 +5.6 +6.0 +4.7 N.D. +4.2
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