Fitness for 5 genes in Escherichia coli ECOR38

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500 ntmdtL and tnaB are separated by 132 nucleotidestnaB and tnaA are separated by 91 nucleotidestnaA and tnaC are separated by 219 nucleotidestnaC and HEPCGN_13680 are separated by 241 nucleotides HEPCGN_13660: mdtL - multidrug efflux MFS transporter MdtL, at 1,482,428 to 1,483,603 mdtL HEPCGN_13665: tnaB - low affinity tryptophan permease TnaB, at 1,483,736 to 1,484,983 tnaB HEPCGN_13670: tnaA - tryptophanase, at 1,485,075 to 1,486,490 tnaA HEPCGN_13675: tnaC - tryptophanase leader peptide, at 1,486,710 to 1,486,784 tnaC HEPCGN_13680: HEPCGN_13680 - tRNA modification GTPase MnmE, at 1,487,026 to 1,488,390 _13680
Group Condition HEPCGN_13660 HEPCGN_13665 HEPCGN_13670 HEPCGN_13675 HEPCGN_13680
mdtL tnaB tnaA tnaC
carbon source Sodium-DL-Lactate +0.0 -0.1 +0.0 -1.2 -3.1
phage Bas55 -0.0 +0.0 +0.0 -1.5 -1.4
phage Bas38 -0.1 +0.0 +0.0 -1.2 -1.6
phage Phi92 -0.0 -0.2 -0.2 -1.0 -1.3
carbon source L-Arabinose -0.0 -0.0 +0.1 -0.9 -1.8
phage RB23 -0.1 -0.3 -0.1 -0.8 -1.3
no phage control Control_ECOR38 -0.1 -0.1 +0.1 +0.0 -2.2
carbon source Casamino-acids +0.1 -0.1 -0.1 -1.3 -0.7
carbon source Sodium-DL-Lactate -0.1 +0.1 -0.0 -1.0 -1.0
phage K20 -0.1 +0.2 +0.0 -0.4 -1.5
carbon source Casamino-acids -0.0 -0.1 +0.0 -0.1 -1.3
phage Bas55 +0.0 +0.1 -0.0 +0.2 -1.7
phage Bas19 +0.1 +0.2 +0.0 -1.4 -0.1
phage Bas38 -0.2 -0.1 +0.0 +0.6 -1.5
phage K20 -0.1 +0.1 +0.1 +0.5 -1.5
phage Bas39 -0.0 -0.1 -0.0 +0.8 -1.4
phage Bas39 +0.1 -0.1 +0.1 +0.6 -1.4
phage Bas48 -0.4 -0.2 -0.1 -0.3 +0.2
phage RB23 +0.1 -0.0 -0.1 -0.7 +0.0
carbon source L-Arabinose +0.0 -0.2 -0.2 -0.3 -0.1
carbon source D-Glucose -0.0 -0.2 -0.0 +0.4 -0.8
phage Bas19 +0.2 -0.1 -0.1 -0.0 -0.6
no phage control Control_ECOR38 -0.1 +0.1 +0.0 +0.6 -0.9
phage Bas51 +0.0 +0.1 -0.0 +1.5 -1.6
phage RB68 +0.1 +0.4 -0.1 +0.5 -0.7
phage TP7 +0.1 +0.1 +0.0 -2.7 +2.6
phage TP7 +0.0 +0.1 -0.1 -1.8 +2.1
phage Bas48 +0.1 -0.0 +0.0 +0.1 +0.9
phage Phi92 +0.2 +0.1 -0.1 +1.7 -0.6
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