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Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECOR38
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Top 29 experiments (either direction), sorted by average fitness
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500 nt
mdtL and tnaB are separated by 132 nucleotides
tnaB and tnaA are separated by 91 nucleotides
tnaA and tnaC are separated by 219 nucleotides
tnaC and HEPCGN_13680 are separated by 241 nucleotides
HEPCGN_13660: mdtL - multidrug efflux MFS transporter MdtL, at 1,482,428 to 1,483,603
mdtL
HEPCGN_13665: tnaB - low affinity tryptophan permease TnaB, at 1,483,736 to 1,484,983
tnaB
HEPCGN_13670: tnaA - tryptophanase, at 1,485,075 to 1,486,490
tnaA
HEPCGN_13675: tnaC - tryptophanase leader peptide, at 1,486,710 to 1,486,784
tnaC
HEPCGN_13680: HEPCGN_13680 - tRNA modification GTPase MnmE, at 1,487,026 to 1,488,390
_13680
Group
Condition
HEPCGN
_13660
HEPCGN
_13665
HEPCGN
_13670
HEPCGN
_13675
HEPCGN
_13680
mdtL
tnaB
tnaA
tnaC
carbon source
Sodium-DL-Lactate
+0.0
-0.1
+0.0
-1.2
-3.1
phage
Bas55
-0.0
+0.0
+0.0
-1.5
-1.4
phage
Bas38
-0.1
+0.0
+0.0
-1.2
-1.6
phage
Phi92
-0.0
-0.2
-0.2
-1.0
-1.3
carbon source
L-Arabinose
-0.0
-0.0
+0.1
-0.9
-1.8
phage
RB23
-0.1
-0.3
-0.1
-0.8
-1.3
no phage control
Control_ECOR38
-0.1
-0.1
+0.1
+0.0
-2.2
carbon source
Casamino-acids
+0.1
-0.1
-0.1
-1.3
-0.7
carbon source
Sodium-DL-Lactate
-0.1
+0.1
-0.0
-1.0
-1.0
phage
K20
-0.1
+0.2
+0.0
-0.4
-1.5
carbon source
Casamino-acids
-0.0
-0.1
+0.0
-0.1
-1.3
phage
Bas55
+0.0
+0.1
-0.0
+0.2
-1.7
phage
Bas19
+0.1
+0.2
+0.0
-1.4
-0.1
phage
Bas38
-0.2
-0.1
+0.0
+0.6
-1.5
phage
K20
-0.1
+0.1
+0.1
+0.5
-1.5
phage
Bas39
-0.0
-0.1
-0.0
+0.8
-1.4
phage
Bas39
+0.1
-0.1
+0.1
+0.6
-1.4
phage
Bas48
-0.4
-0.2
-0.1
-0.3
+0.2
phage
RB23
+0.1
-0.0
-0.1
-0.7
+0.0
carbon source
L-Arabinose
+0.0
-0.2
-0.2
-0.3
-0.1
carbon source
D-Glucose
-0.0
-0.2
-0.0
+0.4
-0.8
phage
Bas19
+0.2
-0.1
-0.1
-0.0
-0.6
no phage control
Control_ECOR38
-0.1
+0.1
+0.0
+0.6
-0.9
phage
Bas51
+0.0
+0.1
-0.0
+1.5
-1.6
phage
RB68
+0.1
+0.4
-0.1
+0.5
-0.7
phage
TP7
+0.1
+0.1
+0.0
-2.7
+2.6
phage
TP7
+0.0
+0.1
-0.1
-1.8
+2.1
phage
Bas48
+0.1
-0.0
+0.0
+0.1
+0.9
phage
Phi92
+0.2
+0.1
-0.1
+1.7
-0.6
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