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Cofit
Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECOR38
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500 nt
adeP and yieF are separated by 53 nucleotides
yieF and yieE are separated by 21 nucleotides
yieE and yidZ are separated by 156 nucleotides
yidZ and mdtL overlap by 26 nucleotides
HEPCGN_13640: adeP - adenine permease AdeP, at 1,478,609 to 1,479,946
adeP
HEPCGN_13645: yieF - class I chromate reductase YieF, at 1,480,000 to 1,480,566
yieF
HEPCGN_13650: yieE - Uncharacterized protein YieE, at 1,480,588 to 1,481,337
yieE
HEPCGN_13655: yidZ - HTH-type transcriptional regulator YidZ, at 1,481,494 to 1,482,453
yidZ
HEPCGN_13660: mdtL - multidrug efflux MFS transporter MdtL, at 1,482,428 to 1,483,603
mdtL
Group
Condition
HEPCGN
_13640
HEPCGN
_13645
HEPCGN
_13650
HEPCGN
_13655
HEPCGN
_13660
adeP
yieF
yieE
yidZ
mdtL
phage
Bas48
+0.0
-0.4
-0.2
+0.1
-0.4
phage
TP7
+0.3
-0.4
-0.7
+0.1
+0.1
phage
Bas55
+0.1
-0.2
-0.5
+0.1
-0.0
phage
Bas19
-0.1
-0.6
+0.1
-0.1
+0.2
carbon source
Casamino-acids
-0.1
-0.2
-0.1
-0.1
+0.1
phage
Bas51
-0.2
+0.0
-0.3
-0.0
+0.0
phage
Bas39
+0.1
-0.3
-0.1
-0.0
-0.0
no phage control
Control_ECOR38
-0.1
+0.0
-0.0
-0.2
-0.1
phage
Bas38
-0.1
-0.1
+0.2
-0.1
-0.2
phage
RB68
+0.1
-0.2
-0.1
-0.2
+0.1
carbon source
D-Glucose
+0.1
-0.1
-0.2
-0.1
-0.0
carbon source
L-Arabinose
+0.0
-0.1
-0.2
+0.0
-0.0
phage
Bas48
+0.1
-0.1
-0.3
-0.1
+0.1
carbon source
L-Arabinose
+0.1
-0.4
-0.1
+0.2
+0.0
phage
K20
+0.0
-0.1
-0.1
+0.1
-0.1
phage
Bas39
-0.1
-0.1
+0.3
-0.3
+0.1
carbon source
Casamino-acids
+0.0
-0.0
-0.1
+0.1
-0.0
phage
Bas19
-0.0
-0.1
+0.0
-0.1
+0.1
phage
RB23
+0.2
-0.3
+0.0
+0.0
+0.1
carbon source
Sodium-DL-Lactate
+0.0
+0.0
-0.1
+0.2
+0.0
phage
Phi92
+0.1
-0.2
+0.0
+0.3
-0.0
phage
RB23
+0.3
-0.1
+0.1
+0.0
-0.1
phage
Bas38
+0.0
+0.3
-0.0
+0.0
-0.1
carbon source
Sodium-DL-Lactate
-0.1
+0.2
+0.3
+0.0
-0.1
no phage control
Control_ECOR38
+0.0
+0.2
+0.1
+0.2
-0.1
phage
Bas55
-0.0
+0.2
+0.0
+0.2
+0.0
phage
K20
+0.2
+0.1
+0.1
+0.1
-0.1
phage
TP7
-0.0
+0.0
-0.2
+0.5
+0.0
phage
Phi92
-0.2
+0.3
-0.0
+0.3
+0.2
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