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Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECOR38
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500 nt
viaA and asnA are separated by 4 nucleotides
asnA and asnC are separated by 151 nucleotides
asnC and mioC are separated by 89 nucleotides
mioC and mnmG are separated by 378 nucleotides
HEPCGN_13480: viaA - ATPase RavA stimulator ViaA, at 1,442,482 to 1,443,933
viaA
HEPCGN_13485: asnA - aspartate--ammonia ligase, at 1,443,938 to 1,444,930
asnA
HEPCGN_13490: asnC - transcriptional regulator AsnC, at 1,445,082 to 1,445,540
asnC
HEPCGN_13495: mioC - FMN-binding protein MioC, at 1,445,630 to 1,446,073
mioC
HEPCGN_13500: mnmG - tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG, at 1,446,452 to 1,448,341
mnmG
Group
Condition
HEPCGN
_13480
HEPCGN
_13485
HEPCGN
_13490
HEPCGN
_13495
HEPCGN
_13500
viaA
asnA
asnC
mioC
mnmG
phage
Bas48
-0.4
-0.9
-0.4
-1.5
-0.6
phage
Bas38
-0.0
+0.1
-0.2
-0.6
-2.5
phage
Bas51
+0.1
-0.0
+0.0
-0.5
-2.3
phage
Bas39
-0.1
-0.4
-0.1
-0.2
-1.8
phage
Bas38
+0.1
+0.0
+0.0
-0.6
-2.2
phage
Bas39
+0.0
-0.1
-0.0
-0.4
-2.0
no phage control
Control_ECOR38
-0.1
-0.1
-0.1
-0.6
-1.6
carbon source
Sodium-DL-Lactate
+0.2
+0.1
-0.3
-0.4
-1.9
carbon source
Sodium-DL-Lactate
-0.1
+0.1
-0.0
+0.1
-2.3
phage
RB23
+0.0
-0.2
-0.1
-1.3
-0.7
phage
Bas55
+0.1
-0.4
+0.2
-0.8
-1.1
phage
RB68
-0.0
+0.1
+0.1
-0.4
-1.7
phage
RB23
+0.0
-0.2
-0.0
-0.7
-1.0
phage
K20
-0.1
-0.1
+0.0
-0.3
-1.4
phage
Bas48
+0.1
-0.1
+0.2
-1.0
-0.9
phage
Bas19
-0.1
+0.1
+0.1
-0.8
-1.1
carbon source
L-Arabinose
+0.2
-0.4
+0.1
-0.4
-1.3
phage
Bas55
-0.0
+0.0
-0.2
-0.6
-0.8
phage
K20
+0.2
-0.3
+0.1
-0.0
-1.6
phage
Bas19
-0.0
-0.4
+0.3
-0.5
-0.8
phage
Phi92
-0.2
-0.3
-0.4
+0.9
-1.3
no phage control
Control_ECOR38
+0.2
+0.3
+0.0
-0.4
-1.4
carbon source
Casamino-acids
-0.0
-0.2
-0.0
-0.2
-0.7
carbon source
Casamino-acids
-0.1
+0.1
-0.2
+0.1
-1.1
phage
Phi92
-0.3
+0.2
-0.1
+0.8
-1.7
carbon source
L-Arabinose
+0.1
+0.3
-0.1
+0.3
-1.7
phage
TP7
+0.1
-0.1
-0.1
-2.2
+1.4
carbon source
D-Glucose
+0.3
-0.0
-0.0
+0.4
-0.9
phage
TP7
+0.3
-0.3
+0.1
-1.6
+1.6
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