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Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECOR38
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Top 29 experiments (either direction), sorted by average fitness
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500 nt
gppA and rep are separated by 46 nucleotides
rep and yifN are separated by 217 nucleotides
yifN and ppiC are separated by 152 nucleotides
ppiC and ilvC are separated by 45 nucleotides
HEPCGN_13315: gppA - guanosine-5'-triphosphate,3'-diphosphate diphosphatase, at 1,406,521 to 1,408,005
gppA
HEPCGN_13320: rep - DNA helicase Rep, at 1,408,052 to 1,410,073
rep
HEPCGN_13325: yifN - Putative uncharacterized protein YifN, at 1,410,291 to 1,410,740
yifN
HEPCGN_13330: ppiC - peptidylprolyl isomerase PpiC, at 1,410,893 to 1,411,174
ppiC
HEPCGN_13335: ilvC - ketol-acid reductoisomerase, at 1,411,220 to 1,412,695
ilvC
Group
Condition
HEPCGN
_13315
HEPCGN
_13320
HEPCGN
_13325
HEPCGN
_13330
HEPCGN
_13335
gppA
rep
yifN
ppiC
ilvC
carbon source
L-Arabinose
-0.2
-4.1
+0.0
-0.5
-4.6
carbon source
Sodium-DL-Lactate
-0.3
-2.6
-0.2
+0.1
-5.4
carbon source
Sodium-DL-Lactate
-0.0
-2.4
-0.1
-0.1
-5.6
carbon source
D-Glucose
-0.1
-1.8
-0.1
-0.2
-4.7
carbon source
L-Arabinose
+0.1
-1.5
-0.0
+0.2
-4.4
carbon source
Casamino-acids
-0.1
-3.9
-0.0
-0.1
-0.2
carbon source
Casamino-acids
-0.1
-3.9
+0.1
+0.2
+0.0
phage
Bas51
-0.1
-3.8
+0.0
+0.2
+0.1
no phage control
Control_ECOR38
-0.3
-2.9
+0.1
-0.2
-0.0
phage
Bas38
-0.3
-2.4
-0.1
-0.2
-0.1
phage
RB23
-0.1
-1.9
-0.0
-0.5
-0.2
phage
Bas39
-0.1
-2.7
+0.0
+0.1
+0.1
phage
Bas55
+0.0
-1.5
+0.0
-0.9
-0.3
phage
Bas55
-0.0
-1.6
-0.2
-0.4
-0.1
phage
Bas38
-0.1
-2.6
-0.0
+0.3
+0.2
phage
Bas39
-0.1
-2.1
+0.2
-0.0
-0.0
phage
RB23
+0.1
-2.0
+0.0
-0.1
-0.1
phage
Bas19
+0.0
-1.5
-0.0
-0.3
-0.0
phage
RB68
-0.1
-1.6
+0.0
-0.1
-0.0
phage
Bas48
+0.3
-1.7
+0.2
-0.4
-0.1
phage
K20
-0.2
-1.2
-0.0
-0.1
-0.0
phage
K20
-0.0
-1.3
+0.1
-0.3
+0.0
phage
Bas48
+0.4
-1.7
+0.0
-0.2
-0.1
phage
Bas19
+0.0
-1.5
+0.1
-0.2
+0.1
phage
Phi92
-0.7
-0.7
+0.4
-0.5
+0.1
no phage control
Control_ECOR38
+0.0
-1.6
+0.1
+0.1
+0.0
phage
Phi92
-0.3
-0.9
+0.4
-0.3
-0.2
phage
TP7
+1.1
-1.4
+0.0
-0.5
-0.1
phage
TP7
+1.1
-1.4
+0.1
-0.2
+0.1
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