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Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECOR38
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Top 29 experiments (either direction), sorted by average fitness
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500 nt
rffA and rffC are separated by 4 nucleotides
rffC and rfbA overlap by 23 nucleotides
rfbA and rffG are separated by 18 nucleotides
rffG and wecC overlap by 1 nucleotides
HEPCGN_13255: rffA - dTDP-4-amino-4,6-dideoxygalactose transaminase, at 1,394,474 to 1,395,604
rffA
HEPCGN_13260: rffC - dTDP-4-amino-4,6-dideoxy-D-galactose acyltransferase, at 1,395,609 to 1,396,283
rffC
HEPCGN_13265: rfbA - glucose-1-phosphate thymidylyltransferase RfbA, at 1,396,261 to 1,397,142
rfbA
HEPCGN_13270: rffG - dTDP-glucose 4,6-dehydratase, at 1,397,161 to 1,398,228
rffG
HEPCGN_13275: wecC - UDP-N-acetyl-D-mannosamine dehydrogenase, at 1,398,228 to 1,399,490
wecC
Group
Condition
HEPCGN
_13255
HEPCGN
_13260
HEPCGN
_13265
HEPCGN
_13270
HEPCGN
_13275
rffA
rffC
rfbA
rffG
wecC
phage
TP7
-4.7
-5.0
-0.6
-1.5
-3.6
phage
TP7
-4.5
-5.2
-0.7
-1.1
-3.8
phage
Bas19
-3.5
-5.1
-0.8
-0.8
-1.2
phage
Bas19
-4.3
-3.9
-1.0
-1.0
-1.0
phage
RB23
-3.9
-4.1
-0.7
-0.8
-1.2
phage
RB23
-3.5
-3.7
-0.7
-0.8
-0.8
phage
Bas48
-2.7
-2.8
-0.7
-0.7
-1.8
phage
Bas48
-2.8
-2.9
-0.3
-0.6
-1.9
phage
Bas55
-0.7
-0.8
-0.5
-0.2
-0.2
phage
K20
-0.7
-1.0
-0.2
-0.0
-0.2
phage
Bas55
-0.7
-0.6
-0.3
-0.1
-0.4
phage
K20
-0.5
-0.6
-0.0
-0.2
-0.4
phage
RB68
-0.6
-0.5
+0.1
-0.1
-0.3
phage
Bas39
-0.2
-0.4
+0.0
-0.1
-0.6
phage
Bas38
-0.3
-0.6
-0.1
+0.1
-0.3
carbon source
Casamino-acids
-0.3
-0.4
-0.0
-0.0
-0.2
phage
Bas51
-0.3
-0.5
-0.1
+0.1
-0.2
carbon source
Sodium-DL-Lactate
-0.3
-0.2
-0.2
+0.1
-0.3
phage
Bas38
-0.4
-0.5
+0.1
+0.0
-0.2
no phage control
Control_ECOR38
-0.3
-0.5
-0.0
+0.0
+0.1
phage
Bas39
-0.2
-0.3
+0.0
+0.1
-0.3
carbon source
Casamino-acids
-0.3
-0.1
-0.1
+0.0
-0.1
carbon source
Sodium-DL-Lactate
-0.2
-0.1
-0.1
+0.3
-0.2
no phage control
Control_ECOR38
-0.0
-0.3
+0.2
-0.0
-0.1
carbon source
L-Arabinose
-0.3
-0.2
-0.1
+0.2
+0.1
carbon source
D-Glucose
-0.1
-0.2
+0.0
+0.1
-0.0
carbon source
L-Arabinose
-0.0
-0.1
+0.1
+0.2
+0.1
phage
Phi92
+1.9
+3.3
+0.6
+0.6
-0.7
phage
Phi92
+1.8
+2.9
+0.9
+0.6
-0.3
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