Fitness for 5 genes in Escherichia coli ECOR38

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500 ntfadB and fadA are separated by 9 nucleotidesfadA and fre are separated by 190 nucleotidesfre and ubiD are separated by 45 nucleotidesubiD and rfaH are separated by 166 nucleotides HEPCGN_12875: fadB - fatty acid oxidation complex subunit alpha FadB, at 1,324,467 to 1,326,656 fadB HEPCGN_12880: fadA - acetyl-CoA C-acyltransferase FadA, at 1,326,666 to 1,327,829 fadA HEPCGN_12885: fre - NAD(P)H-flavin reductase, at 1,328,020 to 1,328,721 fre HEPCGN_12890: ubiD - 4-hydroxy-3-polyprenylbenzoate decarboxylase, at 1,328,767 to 1,330,260 ubiD HEPCGN_12895: rfaH - transcription/translation regulatory transformer protein RfaH, at 1,330,427 to 1,330,915 rfaH
Group Condition HEPCGN_12875 HEPCGN_12880 HEPCGN_12885 HEPCGN_12890 HEPCGN_12895
fadB fadA fre ubiD rfaH
phage Bas19 -0.1 -0.0 -0.3 N.D. -5.9
phage RB23 -0.0 +0.0 +0.2 N.D. -6.1
phage RB23 -0.0 +0.3 -0.1 N.D. -6.0
phage Bas19 +0.0 +0.0 -0.3 N.D. -5.1
phage Bas39 +0.2 -0.0 -0.6 N.D. -4.7
phage Bas39 +0.2 -0.2 -0.4 N.D. -3.3
phage Bas51 -0.0 -0.1 -0.9 N.D. +0.2
no phage control Control_ECOR38 +0.0 -0.1 -0.7 N.D. +0.2
phage K20 -0.1 +0.1 -0.8 N.D. +0.4
phage RB68 -0.1 -0.2 -0.6 N.D. +0.6
phage Bas38 +0.0 -0.1 -0.3 N.D. +0.1
no phage control Control_ECOR38 +0.1 -0.1 -0.3 N.D. +0.1
phage K20 +0.1 +0.0 -0.5 N.D. +0.3
carbon source D-Glucose +0.0 +0.2 -0.3 N.D. +0.0
phage Bas55 +0.0 -0.1 -0.4 N.D. +0.4
carbon source L-Arabinose +0.1 -0.2 -0.5 N.D. +0.4
carbon source L-Arabinose -0.0 +0.1 -0.3 N.D. +0.3
carbon source Casamino-acids -0.1 +0.0 -0.9 N.D. +1.1
phage Bas38 +0.0 -0.0 -0.1 N.D. +0.3
carbon source Sodium-DL-Lactate +0.1 +0.0 -0.1 N.D. +0.4
carbon source Sodium-DL-Lactate -0.1 +0.1 -0.1 N.D. +0.6
phage Bas55 +0.1 +0.0 -0.3 N.D. +0.8
phage Bas48 +0.0 +0.3 -0.9 N.D. +1.8
carbon source Casamino-acids +0.1 +0.4 -0.8 N.D. +2.1
phage Bas48 -0.0 +0.2 -0.1 N.D. +2.1
phage TP7 -0.2 -0.0 +0.7 N.D. +5.8
phage TP7 -0.2 +0.2 +0.4 N.D. +6.2
phage Phi92 -0.1 -0.1 +1.5 N.D. +6.6
phage Phi92 -0.2 +0.2 +1.4 N.D. +6.7
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