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Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECOR38
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500 nt
srkA and yihD are separated by 76 nucleotides
yihD and mobA are separated by 69 nucleotides
mobA and mobB overlap by 4 nucleotides
mobB and 5S_rrna are separated by 102 nucleotides
HEPCGN_12810: srkA - stress response kinase SrkA, at 1,312,309 to 1,313,295
srkA
HEPCGN_12815: yihD - Protein YihD, at 1,313,372 to 1,313,641
yihD
HEPCGN_12820: mobA - molybdenum cofactor guanylyltransferase MobA, at 1,313,711 to 1,314,295
mobA
HEPCGN_12825: mobB - molybdopterin-guanine dinucleotide biosynthesis protein MobB, at 1,314,292 to 1,314,804
mobB
HEPCGN_12830: 5S_rrna - 5S ribosomal RNA, at 1,314,907 to 1,315,022
_rrna
Group
Condition
HEPCGN
_12810
HEPCGN
_12815
HEPCGN
_12820
HEPCGN
_12825
HEPCGN
_12830
srkA
yihD
mobA
mobB
5S_rrna
phage
Bas38
-0.1
-1.0
+0.0
+0.1
N.D.
carbon source
Casamino-acids
+0.1
-0.4
-0.4
+0.0
N.D.
phage
Bas38
+0.1
-0.6
+0.0
-0.2
N.D.
carbon source
Casamino-acids
+0.2
-0.6
+0.1
-0.1
N.D.
carbon source
L-Arabinose
+0.2
-0.7
-0.1
+0.2
N.D.
phage
Phi92
-0.9
-0.2
+0.9
-0.2
N.D.
phage
Bas39
+0.0
-0.4
-0.1
+0.1
N.D.
phage
Bas51
-0.1
-0.2
-0.2
+0.1
N.D.
carbon source
L-Arabinose
+0.2
-0.7
+0.3
-0.0
N.D.
phage
Bas39
-0.1
-0.1
-0.2
+0.1
N.D.
phage
RB23
+0.0
-0.6
+0.3
+0.1
N.D.
phage
Bas19
+0.4
-0.4
+0.2
-0.2
N.D.
phage
K20
+0.3
-0.3
-0.0
+0.0
N.D.
phage
Bas19
+0.6
-0.6
-0.0
+0.0
N.D.
phage
RB68
-0.0
+0.5
-0.3
-0.1
N.D.
phage
Bas48
+0.2
-0.3
+0.1
+0.1
N.D.
carbon source
Sodium-DL-Lactate
-0.1
-0.0
+0.2
+0.2
N.D.
phage
TP7
+0.7
-0.2
-0.1
-0.1
N.D.
no phage control
Control_ECOR38
+0.1
+0.1
+0.2
+0.1
N.D.
phage
Bas55
+0.2
-0.4
+0.6
+0.0
N.D.
phage
K20
+0.1
+0.3
+0.1
-0.0
N.D.
phage
TP7
+0.7
+0.3
-0.4
+0.0
N.D.
phage
RB23
+0.4
+0.1
+0.1
+0.0
N.D.
phage
Bas48
+0.4
+0.1
+0.0
+0.1
N.D.
phage
Bas55
+0.3
+0.0
+0.5
-0.1
N.D.
phage
Phi92
-0.2
+0.0
+1.2
-0.1
N.D.
carbon source
D-Glucose
+0.1
+0.9
-0.1
+0.1
N.D.
carbon source
Sodium-DL-Lactate
-0.0
+0.7
+0.1
+0.2
N.D.
no phage control
Control_ECOR38
-0.0
+0.6
+0.3
+0.1
N.D.
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