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Cofit
Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECOR38
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Top 29 experiments (either direction), sorted by average fitness
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500 nt
HEPCGN_12675 and yihQ are separated by 197 nucleotides
yihQ and melB are separated by 45 nucleotides
melB and yihO are separated by 42 nucleotides
yihO and ompL are separated by 66 nucleotides
HEPCGN_12675: HEPCGN_12675 - aldose-1-epimerase, at 1,284,008 to 1,284,910
_12675
HEPCGN_12680: yihQ - sulfoquinovosidase, at 1,285,108 to 1,287,144
yihQ
HEPCGN_12685: melB - MFS/sugar transport protein, at 1,287,190 to 1,288,575
melB
HEPCGN_12690: yihO - Putative sulfoquinovose importer, at 1,288,618 to 1,290,021
yihO
HEPCGN_12695: ompL - porin OmpL, at 1,290,088 to 1,290,780
ompL
Group
Condition
HEPCGN
_12675
HEPCGN
_12680
HEPCGN
_12685
HEPCGN
_12690
HEPCGN
_12695
yihQ
melB
yihO
ompL
phage
TP7
-0.1
+0.0
-0.1
-0.2
-0.5
phage
Phi92
+0.0
-0.0
-0.3
-0.3
-0.0
phage
RB68
+0.1
-0.2
-0.2
-0.2
-0.2
phage
Bas38
+0.0
-0.1
-0.1
-0.1
-0.3
phage
Phi92
-0.2
+0.1
-0.2
+0.1
-0.3
phage
Bas19
-0.1
-0.1
-0.1
-0.1
+0.0
phage
Bas55
-0.2
+0.0
+0.0
-0.0
-0.1
phage
Bas38
+0.0
-0.1
-0.2
-0.1
+0.1
phage
RB23
+0.1
+0.0
-0.2
+0.1
-0.2
phage
Bas48
+0.1
-0.0
-0.1
-0.0
-0.1
phage
RB23
+0.0
+0.1
+0.1
-0.1
-0.2
phage
Bas51
+0.1
-0.1
-0.1
+0.0
-0.0
phage
TP7
+0.2
+0.1
-0.3
-0.1
+0.1
no phage control
Control_ECOR38
-0.1
-0.0
+0.1
+0.0
-0.1
phage
Bas39
-0.1
-0.1
-0.1
-0.0
+0.3
phage
K20
+0.1
-0.0
-0.1
+0.1
-0.0
carbon source
Casamino-acids
-0.0
+0.0
+0.1
+0.1
-0.1
phage
Bas39
+0.2
+0.0
-0.1
-0.2
+0.2
carbon source
Sodium-DL-Lactate
-0.0
+0.1
-0.2
+0.0
+0.3
no phage control
Control_ECOR38
+0.1
+0.1
-0.1
+0.1
-0.0
phage
Bas48
-0.2
+0.0
+0.1
+0.1
+0.2
carbon source
L-Arabinose
+0.2
-0.0
-0.1
+0.1
-0.1
phage
K20
-0.0
+0.0
+0.2
+0.1
+0.0
carbon source
Casamino-acids
-0.0
+0.1
+0.0
+0.2
+0.1
phage
Bas19
+0.1
-0.1
+0.1
+0.3
+0.0
phage
Bas55
+0.2
+0.1
+0.2
+0.2
-0.1
carbon source
D-Glucose
+0.2
+0.1
+0.0
+0.2
+0.3
carbon source
Sodium-DL-Lactate
+0.2
+0.1
+0.1
+0.1
+0.3
carbon source
L-Arabinose
+0.2
+0.2
+0.2
+0.1
+0.5
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