Fitness for 5 genes in Escherichia coli ECOR38

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500 ntfabY and dtd are separated by 44 nucleotidesdtd and yihY overlap by 4 nucleotidesyihY and yihX overlap by 7 nucleotidesyihX and csqR are separated by 98 nucleotides HEPCGN_12630: fabY - fatty acid biosynthesis protein FabY, at 1,276,075 to 1,277,016 fabY HEPCGN_12635: dtd - D-aminoacyl-tRNA deacylase, at 1,277,061 to 1,277,498 dtd HEPCGN_12640: yihY - virulence factor BrkB family protein, at 1,277,495 to 1,278,367 yihY HEPCGN_12645: yihX - glucose-1-phosphatase, at 1,278,361 to 1,278,960 yihX HEPCGN_12650: csqR - HTH-type transcriptional repressor CsqR, at 1,279,059 to 1,279,844 csqR
Group Condition HEPCGN_12630 HEPCGN_12635 HEPCGN_12640 HEPCGN_12645 HEPCGN_12650
fabY dtd yihY yihX csqR
phage TP7 -0.3 +0.2 -0.4 -0.5 -0.5
phage TP7 +0.0 +0.3 -0.3 -0.4 -0.5
carbon source L-Arabinose -0.4 -0.0 +0.0 -0.0 -0.3
carbon source Casamino-acids +0.1 +0.0 +0.0 -0.1 -0.7
phage Bas19 -0.0 +0.1 -0.2 -0.3 -0.2
phage RB23 -0.1 -0.1 +0.0 -0.1 -0.3
phage K20 -0.0 +0.2 +0.2 -0.1 -0.8
phage Bas19 -0.1 +0.2 -0.1 -0.1 -0.4
phage Bas48 +0.4 +0.3 -0.1 +0.1 -1.2
phage RB23 +0.1 +0.0 +0.1 -0.2 -0.5
phage Bas39 +0.2 -0.4 +0.1 +0.1 -0.4
phage Bas48 +0.1 +0.1 -0.1 -0.1 -0.4
carbon source Casamino-acids +0.1 +0.5 +0.1 +0.1 -1.0
phage RB68 -0.1 +0.2 -0.0 +0.2 -0.5
no phage control Control_ECOR38 -0.3 +0.0 +0.3 +0.2 -0.3
phage Bas55 -0.0 -0.1 +0.1 +0.1 -0.3
phage K20 +0.1 +0.0 +0.2 +0.0 -0.4
phage Bas38 +0.2 -0.1 +0.1 -0.1 -0.1
phage Bas38 +0.4 -0.0 -0.1 -0.1 -0.2
phage Bas39 +0.0 -0.0 +0.4 +0.0 -0.4
carbon source D-Glucose -0.3 +0.0 +0.2 -0.0 +0.1
carbon source L-Arabinose +0.0 -0.6 +0.3 +0.1 +0.2
phage Bas51 +0.2 -0.3 +0.3 +0.1 -0.1
no phage control Control_ECOR38 +0.2 -0.1 +0.2 +0.1 -0.1
phage Phi92 -0.2 +0.7 +0.2 -0.1 -0.2
phage Bas55 +0.0 +0.4 +0.2 +0.0 -0.3
carbon source Sodium-DL-Lactate +0.2 +0.0 +0.2 -0.0 -0.0
carbon source Sodium-DL-Lactate +0.0 +0.5 +0.3 -0.1 -0.1
phage Phi92 -0.0 +0.3 +0.0 +0.0 +0.2
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