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Cofit
Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECOR38
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Top 29 experiments (either direction), sorted by average fitness
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500 nt
HEPCGN_11790 and HEPCGN_11795 overlap by 4 nucleotides
HEPCGN_11795 and HEPCGN_11800 overlap by 4 nucleotides
HEPCGN_11800 and HEPCGN_11805 are separated by 14 nucleotides
HEPCGN_11805 and HEPCGN_11810 are separated by 5 nucleotides
HEPCGN_11790: HEPCGN_11790 - short-chain fatty acid transporter, at 1,096,230 to 1,097,810
_11790
HEPCGN_11795: HEPCGN_11795 - phage tail protein, at 1,097,807 to 1,098,514
_11795
HEPCGN_11800: HEPCGN_11800 - hypothetical protein, at 1,098,511 to 1,098,966
_11800
HEPCGN_11805: HEPCGN_11805 - nucleotidyltransferase, at 1,098,981 to 1,099,772
_11805
HEPCGN_11810: HEPCGN_11810 - SPFH domain / Band 7 family, at 1,099,778 to 1,100,905
_11810
Group
Condition
HEPCGN
_11790
HEPCGN
_11795
HEPCGN
_11800
HEPCGN
_11805
HEPCGN
_11810
phage
Phi92
-0.0
-0.5
-0.1
-0.1
-0.1
phage
K20
+0.1
-0.4
-0.2
-0.1
-0.2
carbon source
Sodium-DL-Lactate
+0.0
-0.1
-0.0
-0.6
+0.1
carbon source
Sodium-DL-Lactate
+0.1
-0.3
-0.0
-0.1
-0.1
phage
Bas39
-0.0
+0.0
-0.5
+0.1
+0.1
carbon source
L-Arabinose
-0.0
-0.0
-0.2
-0.0
+0.1
phage
Bas55
+0.0
-0.0
-0.0
-0.2
+0.1
phage
Bas39
+0.0
-0.2
-0.0
+0.1
-0.0
phage
Bas38
+0.2
-0.2
-0.1
-0.1
+0.1
phage
Bas19
+0.0
-0.1
-0.0
-0.2
+0.2
carbon source
Casamino-acids
-0.0
+0.1
-0.2
-0.2
+0.1
carbon source
L-Arabinose
-0.1
+0.4
-0.2
-0.1
-0.1
carbon source
D-Glucose
-0.1
+0.0
+0.3
-0.2
-0.1
phage
RB23
+0.1
-0.0
-0.3
+0.1
+0.1
no phage control
Control_ECOR38
+0.0
+0.1
-0.2
+0.1
+0.1
carbon source
Casamino-acids
+0.0
-0.0
+0.3
-0.3
-0.0
phage
Bas48
-0.0
+0.1
-0.2
-0.0
+0.1
phage
Bas38
-0.1
+0.0
-0.1
+0.0
+0.1
no phage control
Control_ECOR38
-0.0
-0.1
+0.1
+0.0
+0.0
phage
K20
+0.1
+0.0
-0.0
-0.1
-0.0
phage
Phi92
+0.2
-0.4
+0.2
-0.0
+0.0
phage
RB23
+0.0
+0.0
+0.1
+0.1
-0.2
phage
Bas55
+0.0
+0.1
-0.1
+0.2
-0.0
phage
Bas51
+0.1
-0.1
+0.2
+0.1
-0.1
phage
Bas19
-0.0
-0.0
-0.1
+0.3
+0.1
phage
Bas48
+0.1
+0.2
+0.0
-0.0
-0.0
phage
TP7
+0.0
+0.2
+0.2
-0.4
+0.2
phage
TP7
+0.0
+0.2
-0.0
+0.2
-0.0
phage
RB68
+0.2
+0.3
+0.1
-0.1
+0.1
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