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Cofit
Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECOR38
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Top 29 experiments (either direction), sorted by average fitness
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500 nt
HEPCGN_11760 and HEPCGN_11765 overlap by 13 nucleotides
HEPCGN_11765 and HEPCGN_11770 are separated by 9 nucleotides
HEPCGN_11770 and HEPCGN_11775 are separated by 98 nucleotides
HEPCGN_11775 and HEPCGN_11780 overlap by 10 nucleotides
HEPCGN_11760: HEPCGN_11760 - Tail protein X, putative, at 1,092,007 to 1,092,216
_11760
HEPCGN_11765: HEPCGN_11765 - phage protein D, at 1,092,204 to 1,093,244
_11765
HEPCGN_11770: HEPCGN_11770 - phage baseplate assembly protein V, at 1,093,254 to 1,093,955
_11770
HEPCGN_11775: HEPCGN_11775 - baseplate protein, at 1,094,054 to 1,094,413
_11775
HEPCGN_11780: HEPCGN_11780 - baseplate protein, at 1,094,404 to 1,095,519
_11780
Group
Condition
HEPCGN
_11760
HEPCGN
_11765
HEPCGN
_11770
HEPCGN
_11775
HEPCGN
_11780
carbon source
L-Arabinose
-0.5
-0.4
-0.1
-0.7
+0.2
phage
Bas55
-0.3
-0.3
-0.0
-0.2
-0.2
phage
RB23
+0.1
+0.0
-0.2
-0.5
-0.3
phage
RB68
+0.3
-0.0
-0.3
-0.4
-0.3
phage
K20
+0.0
-0.1
+0.2
-0.5
-0.4
phage
Bas48
-0.5
+0.1
-0.1
+0.3
-0.3
carbon source
Casamino-acids
-0.1
-0.0
-0.1
-0.4
+0.1
phage
Bas51
-0.2
-0.2
-0.0
-0.3
+0.2
phage
Bas55
+0.1
+0.2
+0.1
-0.8
-0.1
carbon source
L-Arabinose
-0.3
+0.2
-0.1
+0.2
-0.3
phage
Bas19
-0.2
+0.1
-0.4
+0.3
-0.2
phage
RB23
+0.3
+0.0
-0.3
+0.0
-0.2
phage
Bas38
-0.3
-0.1
+0.2
+0.2
-0.2
carbon source
Casamino-acids
+0.2
-0.2
+0.1
-0.1
-0.1
phage
Bas39
-0.0
+0.1
+0.3
-0.3
-0.0
phage
Phi92
-0.2
+0.1
-0.1
-0.1
+0.3
carbon source
Sodium-DL-Lactate
+0.0
-0.0
+0.1
+0.0
-0.1
phage
Bas48
+0.1
+0.1
-0.1
-0.1
+0.1
carbon source
Sodium-DL-Lactate
-0.1
-0.1
-0.1
+0.4
-0.0
phage
Bas39
+0.1
-0.3
+0.3
+0.1
+0.0
no phage control
Control_ECOR38
-0.0
-0.0
+0.0
+0.2
+0.1
phage
Phi92
+0.2
+0.1
-0.2
-0.3
+0.5
phage
Bas38
+0.2
-0.0
-0.1
+0.3
-0.0
carbon source
D-Glucose
-0.1
+0.1
+0.2
+0.4
-0.2
no phage control
Control_ECOR38
+0.0
-0.1
+0.1
+0.3
+0.2
phage
K20
+0.2
+0.2
+0.1
+0.0
+0.0
phage
Bas19
+0.1
+0.2
+0.2
+0.0
+0.2
phage
TP7
-0.0
-0.0
+0.4
+0.6
-0.1
phage
TP7
-0.1
+0.5
+0.1
+0.5
-0.0
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