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Cofit
Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECOR38
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Top 29 experiments (either direction), sorted by average fitness
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500 nt
HEPCGN_11735 and HEPCGN_11740 overlap by 1 nucleotides
HEPCGN_11740 and HEPCGN_11745 are separated by 50 nucleotides
HEPCGN_11745 and HEPCGN_11750 are separated by 189 nucleotides
HEPCGN_11750 and HEPCGN_11755 overlap by 1 nucleotides
HEPCGN_11735: HEPCGN_11735 - phage tail protein, at 1,086,173 to 1,087,597
_11735
HEPCGN_11740: HEPCGN_11740 - phage major tail tube protein, at 1,087,597 to 1,088,121
_11740
HEPCGN_11745: HEPCGN_11745 - Phage tail assembly protein, at 1,088,172 to 1,088,489
_11745
HEPCGN_11750: HEPCGN_11750 - phage tail tape measure protein, at 1,088,679 to 1,091,054
_11750
HEPCGN_11755: HEPCGN_11755 - chemotaxis protein, at 1,091,054 to 1,092,007
_11755
Group
Condition
HEPCGN
_11735
HEPCGN
_11740
HEPCGN
_11745
HEPCGN
_11750
HEPCGN
_11755
phage
Bas48
+0.0
-0.7
-0.3
-0.1
-0.3
phage
TP7
-0.1
-1.2
+0.1
+0.1
-0.1
phage
Bas48
-0.1
-0.4
-0.3
-0.2
-0.2
phage
Bas55
-0.1
-0.6
-0.1
-0.1
+0.2
phage
RB23
-0.1
-0.5
-0.3
+0.1
+0.0
phage
Bas19
+0.1
-0.4
-0.5
+0.0
-0.1
carbon source
Casamino-acids
-0.2
-0.6
+0.1
+0.1
+0.0
phage
TP7
-0.0
-0.3
-0.1
-0.1
+0.0
phage
Bas39
-0.0
-0.3
-0.1
+0.0
-0.1
phage
RB23
-0.1
+0.3
-0.3
-0.1
-0.1
phage
Bas38
-0.2
+0.2
-0.3
+0.1
-0.1
phage
Bas39
-0.0
-0.1
-0.5
+0.1
+0.3
carbon source
L-Arabinose
-0.1
+0.3
-0.5
-0.0
+0.0
no phage control
Control_ECOR38
+0.1
+0.2
-0.4
-0.0
+0.1
carbon source
D-Glucose
-0.0
-0.2
+0.2
-0.0
+0.1
phage
Bas55
-0.1
+0.1
-0.0
-0.1
+0.1
carbon source
Casamino-acids
-0.1
-0.0
-0.1
-0.1
+0.3
phage
K20
+0.1
+0.1
-0.0
-0.1
-0.0
phage
Bas19
-0.1
+0.3
+0.0
-0.1
-0.1
phage
Phi92
-0.1
-0.8
+0.9
+0.1
-0.0
phage
Bas38
+0.0
+0.3
-0.4
-0.0
+0.2
phage
RB68
+0.0
+0.3
-0.0
-0.0
-0.0
carbon source
Sodium-DL-Lactate
-0.1
+0.7
-0.5
-0.1
+0.2
carbon source
Sodium-DL-Lactate
-0.1
+0.1
+0.0
-0.1
+0.4
carbon source
L-Arabinose
-0.2
+0.7
-0.0
-0.0
+0.0
phage
K20
+0.0
+0.3
-0.1
-0.0
+0.3
phage
Bas51
-0.0
+0.2
+0.2
+0.1
+0.2
no phage control
Control_ECOR38
+0.1
+0.2
+0.4
-0.0
+0.2
phage
Phi92
+0.2
-0.0
+1.1
+0.0
-0.1
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