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Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECOR38
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Top 29 experiments (either direction), sorted by average fitness
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500 nt
pgi and lysC are separated by 524 nucleotides
lysC and HEPCGN_11695 are separated by 54 nucleotides
HEPCGN_11695 and dfsB are separated by 333 nucleotides
dfsB and HEPCGN_11705 are separated by 18 nucleotides
HEPCGN_11685: pgi - glucose-6-phosphate isomerase, at 1,077,810 to 1,079,459
pgi
HEPCGN_11690: lysC - lysine-sensitive aspartokinase 3, at 1,079,984 to 1,081,333
lysC
HEPCGN_11695: HEPCGN_11695 - DNA-binding protein, at 1,081,388 to 1,081,735
_11695
HEPCGN_11700: dfsB - DUF1706 domain-containing protein, at 1,082,069 to 1,082,587
dfsB
HEPCGN_11705: HEPCGN_11705 - ISL3-like element ISEc53 family transposase, at 1,082,606 to 1,083,826
_11705
Group
Condition
HEPCGN
_11685
HEPCGN
_11690
HEPCGN
_11695
HEPCGN
_11700
HEPCGN
_11705
pgi
lysC
dfsB
phage
TP7
-4.5
+0.1
-0.3
N.D.
N.D.
phage
TP7
-4.6
+0.2
-0.2
N.D.
N.D.
phage
RB23
-3.9
-0.1
-0.3
N.D.
N.D.
phage
Bas19
-3.6
-0.2
-0.1
N.D.
N.D.
phage
RB23
-4.2
+0.2
+0.1
N.D.
N.D.
phage
Bas19
-3.7
+0.1
+0.0
N.D.
N.D.
phage
Bas48
-1.9
-0.1
-0.4
N.D.
N.D.
phage
Bas48
-1.9
-0.1
+0.2
N.D.
N.D.
carbon source
Casamino-acids
-1.5
+0.0
-0.1
N.D.
N.D.
carbon source
D-Glucose
-1.5
+0.1
+0.3
N.D.
N.D.
phage
K20
-1.2
+0.1
+0.1
N.D.
N.D.
phage
RB68
-1.0
+0.1
-0.2
N.D.
N.D.
phage
Bas55
-0.8
-0.1
+0.0
N.D.
N.D.
carbon source
Sodium-DL-Lactate
-0.4
-0.0
-0.3
N.D.
N.D.
carbon source
Casamino-acids
-0.9
+0.1
+0.1
N.D.
N.D.
carbon source
Sodium-DL-Lactate
-0.6
-0.0
-0.0
N.D.
N.D.
phage
Bas55
-0.5
+0.0
-0.2
N.D.
N.D.
phage
K20
-0.5
+0.2
-0.2
N.D.
N.D.
phage
Phi92
-0.6
+0.1
+0.0
N.D.
N.D.
no phage control
Control_ECOR38
-0.5
-0.1
+0.1
N.D.
N.D.
phage
Bas39
-0.5
-0.0
+0.1
N.D.
N.D.
phage
Phi92
-0.2
+0.1
-0.2
N.D.
N.D.
phage
Bas51
-0.1
-0.1
-0.0
N.D.
N.D.
phage
Bas38
-0.2
+0.0
-0.1
N.D.
N.D.
no phage control
Control_ECOR38
-0.2
+0.1
-0.1
N.D.
N.D.
carbon source
L-Arabinose
-0.1
+0.0
+0.2
N.D.
N.D.
phage
Bas38
+0.3
-0.1
+0.1
N.D.
N.D.
phage
Bas39
+0.6
+0.0
-0.0
N.D.
N.D.
carbon source
L-Arabinose
+0.3
+0.3
+0.2
N.D.
N.D.
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