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Cofit
Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECOR38
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Top 29 experiments (either direction), sorted by average fitness
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500 nt
HEPCGN_11060 and yeeS are separated by 11 nucleotides
yeeS and HEPCGN_11070 are separated by 62 nucleotides
HEPCGN_11070 and HEPCGN_11075 overlap by 1 nucleotides
HEPCGN_11075 and cbtA are separated by 49 nucleotides
HEPCGN_11060: HEPCGN_11060 - restriction endonuclease, at 951,554 to 952,033
_11060
HEPCGN_11065: yeeS - UPF0758 protein YeeS, at 952,045 to 952,521
yeeS
HEPCGN_11070: HEPCGN_11070 - DUF987 domain-containing protein, at 952,584 to 952,805
_11070
HEPCGN_11075: HEPCGN_11075 - Phage-related protein, at 952,805 to 952,918
_11075
HEPCGN_11080: cbtA - type IV toxin-antitoxin system toxin CbtA, at 952,968 to 953,336
cbtA
Group
Condition
HEPCGN
_11060
HEPCGN
_11065
HEPCGN
_11070
HEPCGN
_11075
HEPCGN
_11080
yeeS
cbtA
phage
Phi92
-0.7
-0.8
-0.0
+0.5
-1.2
carbon source
L-Arabinose
-0.3
-0.6
+0.0
+0.7
-1.9
no phage control
Control_ECOR38
-0.7
-0.8
-0.1
+0.4
-0.3
phage
K20
-0.4
+0.8
+0.3
-2.1
+0.2
phage
Bas39
+0.5
-0.3
-0.5
+0.2
-1.0
carbon source
Casamino-acids
+0.4
-0.3
-0.1
-1.0
+0.1
phage
Bas38
-0.2
-0.3
-0.2
-0.3
+0.3
phage
Bas38
-0.1
-0.6
-0.4
+0.4
+0.0
phage
TP7
-0.6
+0.2
+0.4
+0.8
-1.2
no phage control
Control_ECOR38
-0.1
+0.2
-0.1
-0.3
-0.1
phage
RB68
+0.1
+0.8
-0.3
-0.1
-0.7
phage
RB23
+0.3
-0.3
-0.3
-0.5
+0.7
phage
TP7
-0.8
+0.9
+0.5
+0.1
-0.9
carbon source
Sodium-DL-Lactate
+0.3
+0.4
+0.1
+0.0
-1.0
carbon source
Casamino-acids
+0.1
+0.4
+0.1
+0.2
-0.6
phage
Bas48
+0.1
+1.2
-0.5
-0.3
-0.2
carbon source
Sodium-DL-Lactate
+0.4
+0.0
-0.2
-0.1
+0.2
phage
Bas19
+0.5
+0.9
+0.3
-0.0
-1.1
phage
Bas19
-0.6
-0.1
+0.5
+0.2
+0.5
phage
Bas51
+0.1
-0.5
-0.1
+0.9
+0.2
phage
Bas55
-0.5
-0.1
-0.1
+0.7
+0.6
phage
Bas39
+0.1
+0.3
-0.2
+0.3
+0.3
phage
Bas55
+0.2
+1.0
+0.4
-0.2
-0.4
phage
K20
+0.1
+0.9
+0.1
-0.6
+0.4
carbon source
L-Arabinose
-0.1
-0.5
+0.4
+0.7
+0.6
phage
RB23
-0.4
+0.7
+0.1
+0.7
+0.0
phage
Phi92
-0.3
+0.7
-0.2
-0.2
+1.1
carbon source
D-Glucose
-0.1
+0.9
+0.3
+0.6
-0.2
phage
Bas48
+0.4
+0.7
-0.1
+1.1
+0.0
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