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Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECOR38
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Top 29 experiments (either direction), sorted by average fitness
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500 nt
blaEC and blc are separated by 87 nucleotides
blc and sugE overlap by 4 nucleotides
sugE and HEPCGN_10605 are separated by 174 nucleotides
HEPCGN_10605 and ecnA are separated by 110 nucleotides
HEPCGN_10590: blaEC - BlaEC family class C beta-lactamase, at 860,562 to 861,695
blaEC
HEPCGN_10595: blc - lipocalin Blc, at 861,783 to 862,316
blc
HEPCGN_10600: sugE - quaternary ammonium compound efflux SMR transporter SugE, at 862,313 to 862,630
sugE
HEPCGN_10605: HEPCGN_10605 - Entericidin B, at 862,805 to 862,951
_10605
HEPCGN_10610: ecnA - lipoprotein antitoxin entericidin A, at 863,062 to 863,187
ecnA
Group
Condition
HEPCGN
_10590
HEPCGN
_10595
HEPCGN
_10600
HEPCGN
_10605
HEPCGN
_10610
blaEC
blc
sugE
ecnA
phage
K20
+0.0
-0.0
-0.1
+0.2
-2.0
phage
TP7
-0.0
+0.1
-1.0
+0.3
-1.0
carbon source
Casamino-acids
-0.0
+0.0
-0.0
-0.0
-1.4
carbon source
L-Arabinose
-0.0
-0.3
-0.1
-0.1
-0.8
phage
Bas55
+0.0
-0.2
-0.4
-0.5
-0.1
phage
Bas38
+0.2
-0.1
-0.2
-0.2
-0.7
phage
Bas39
+0.1
+0.0
-0.9
-0.4
+0.1
phage
Bas48
-0.2
-0.2
-0.7
-0.1
+0.4
phage
Bas48
-0.0
+0.2
-1.0
+0.1
+0.1
carbon source
Sodium-DL-Lactate
-0.1
-0.2
+0.2
-0.2
-0.4
phage
RB23
+0.0
+0.3
-0.0
+0.2
-1.1
carbon source
L-Arabinose
+0.1
-0.1
-0.0
-0.3
-0.2
phage
TP7
+0.0
-0.2
-1.1
+0.0
+0.8
phage
Phi92
-0.1
-0.1
-0.6
-0.3
+0.6
phage
RB23
-0.1
+0.1
-0.2
-0.1
-0.2
phage
Bas38
+0.0
-0.2
+0.3
-0.5
+0.1
no phage control
Control_ECOR38
+0.0
+0.2
-0.3
-0.1
-0.0
phage
Bas19
-0.0
+0.0
-1.0
-0.0
+1.0
phage
Phi92
+0.1
+0.3
-1.4
-0.6
+1.5
phage
Bas19
-0.1
+0.1
-0.3
+0.4
-0.0
no phage control
Control_ECOR38
+0.1
-0.2
-0.4
+0.2
+0.5
phage
K20
-0.1
+0.1
-0.1
+0.2
+0.2
carbon source
D-Glucose
-0.1
+0.1
-0.1
-0.2
+0.5
carbon source
Sodium-DL-Lactate
+0.0
-0.1
+0.7
+0.2
-0.5
carbon source
Casamino-acids
+0.1
-0.2
+0.1
+0.3
+0.0
phage
Bas39
+0.1
-0.0
-0.2
-0.1
+0.6
phage
Bas51
+0.0
+0.1
-0.1
-0.1
+0.9
phage
Bas55
+0.1
-0.1
+0.1
-0.0
+1.3
phage
RB68
-0.1
+0.4
+0.2
+0.4
+1.5
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