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Cofit
Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECOR38
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500 nt
ythA and yjhC are separated by 42 nucleotides
yjhC and yjhB are separated by 11 nucleotides
yjhB and HEPCGN_09920 are separated by 1828 nucleotides
HEPCGN_09920 and intB are separated by 525 nucleotides
HEPCGN_09905: ythA - Uncharacterized protein YthA, at 725,114 to 725,239
ythA
HEPCGN_09910: yjhC - Uncharacterized oxidoreductase YjhC, at 725,282 to 726,400
yjhC
HEPCGN_09915: yjhB - MFS transporter, at 726,412 to 727,629
yjhB
HEPCGN_09920: HEPCGN_09920 - Putative sulfatase, at 729,458 to 729,790
_09920
HEPCGN_09925: intB - Putative protein IntB, at 730,316 to 731,581
intB
Group
Condition
HEPCGN
_09905
HEPCGN
_09910
HEPCGN
_09915
HEPCGN
_09920
HEPCGN
_09925
ythA
yjhC
yjhB
intB
phage
K5
N.D.
-0.1
-0.4
-0.1
-0.1
no phage control
Control_ECOR38
N.D.
+0.2
-0.7
-0.2
-0.0
carbon source
Sodium-DL-Lactate
N.D.
-0.2
-0.2
-0.2
-0.1
phage
Phi92
N.D.
-0.0
-0.5
-0.0
-0.1
phage
CEV1
N.D.
-0.1
+0.2
-0.5
-0.2
phage
TP7
N.D.
-0.6
+0.0
+0.2
-0.1
phage
K25
N.D.
+0.2
-0.4
-0.3
+0.1
phage
Bas61
N.D.
+0.0
+0.1
-0.6
+0.1
phage
TP15
N.D.
-0.3
+0.2
-0.0
-0.3
phage
Bas19
N.D.
-0.2
-0.5
+0.3
+0.1
phage
Bas21
N.D.
-0.1
-0.4
+0.3
-0.1
phage
RB49
N.D.
+0.1
-0.2
+0.0
-0.1
carbon source
Casamino-acids
N.D.
+0.1
-0.2
-0.2
+0.1
phage
Phi92
N.D.
+0.3
-0.2
-0.0
-0.1
phage
RB23
N.D.
+0.3
-0.1
+0.0
-0.2
phage
Bas55
N.D.
+0.2
-0.2
+0.1
-0.1
phage
RB23
N.D.
+0.2
-0.1
-0.2
+0.0
carbon source
L-Arabinose
N.D.
+0.2
-0.0
-0.2
+0.1
phage
Bas61
N.D.
+0.1
+0.2
-0.3
+0.1
phage
TP7
N.D.
+0.2
-0.2
+0.1
+0.1
phage
Bas67
N.D.
+0.2
-0.4
+0.3
+0.0
phage
Bas18
N.D.
-0.3
+0.1
+0.3
+0.1
phage
Bas55
N.D.
+0.0
+0.3
+0.1
-0.1
phage
RB49
N.D.
+0.1
-0.1
+0.0
+0.2
phage
K20
N.D.
-0.1
-0.0
+0.4
+0.1
phage
TP12
N.D.
+0.3
+0.2
+0.0
-0.1
phage
Bas38
N.D.
+0.2
+0.3
+0.1
-0.0
phage
K20
N.D.
+0.1
+0.1
+0.4
+0.1
no phage control
Control_ECOR38
N.D.
+0.2
+0.2
+0.3
+0.1
phage
JK38
N.D.
+0.3
+0.2
+0.3
+0.0
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