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Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECOR38
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Top 29 experiments (either direction), sorted by average fitness
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500 nt
capU and cDA1 are separated by 2 nucleotides
cDA1 and HEPCGN_09780 are separated by 206 nucleotides
HEPCGN_09780 and HEPCGN_09785 are separated by 241 nucleotides
HEPCGN_09785 and ltrA are separated by 591 nucleotides
HEPCGN_09770: capU - putative hexosyltransferase CapU, at 699,488 to 700,576
capU
HEPCGN_09775: cDA1 - carbohydrate transporter, at 700,579 to 701,400
cDA1
HEPCGN_09780: HEPCGN_09780 - Transposase (Identified by ISEscan HMM), at 701,607 to 701,909
_09780
HEPCGN_09785: HEPCGN_09785 - IS911 orfA, at 702,151 to 702,390
_09785
HEPCGN_09790: ltrA - group II intron reverse transcriptase/maturase, at 702,982 to 704,505
ltrA
Group
Condition
HEPCGN
_09770
HEPCGN
_09775
HEPCGN
_09780
HEPCGN
_09785
HEPCGN
_09790
capU
cDA1
ltrA
phage
TP7
-0.9
-1.3
-0.2
+0.0
N.D.
phage
TP7
-0.8
-0.7
+0.2
-0.3
N.D.
no phage control
Control_ECOR38
-0.2
+0.0
-0.2
-0.6
N.D.
phage
Phi92
-1.0
-0.4
+0.3
+0.2
N.D.
phage
Bas48
-0.6
-1.0
+0.3
+0.3
N.D.
phage
Bas38
-0.3
+0.0
-0.3
-0.2
N.D.
phage
Bas55
-0.3
-0.3
-0.3
+0.2
N.D.
phage
Bas48
-0.4
-0.6
+0.2
+0.5
N.D.
carbon source
Sodium-DL-Lactate
+0.1
+0.2
-0.8
+0.1
N.D.
phage
RB23
-0.2
-0.5
+0.3
+0.1
N.D.
phage
Bas38
+0.1
-0.1
-0.1
-0.1
N.D.
carbon source
Sodium-DL-Lactate
+0.1
-0.7
-0.0
+0.5
N.D.
phage
Bas39
+0.1
-0.1
+0.2
-0.3
N.D.
phage
RB23
-0.6
+0.2
+0.2
+0.1
N.D.
phage
K20
+0.0
-0.2
+0.2
-0.1
N.D.
phage
Phi92
-1.1
+0.3
+0.6
+0.2
N.D.
phage
Bas19
+0.5
-0.1
-0.1
-0.2
N.D.
phage
RB68
+0.1
-0.6
+0.4
+0.1
N.D.
carbon source
L-Arabinose
+0.1
-0.0
-0.7
+0.7
N.D.
phage
K20
-0.0
-0.2
-0.0
+0.4
N.D.
phage
Bas55
-0.0
-0.8
+0.6
+0.5
N.D.
no phage control
Control_ECOR38
+0.1
+0.2
+0.0
+0.1
N.D.
phage
Bas19
-0.2
+0.4
+0.0
+0.2
N.D.
phage
Bas51
+0.0
+0.3
+0.3
-0.2
N.D.
phage
Bas39
-0.0
+0.1
+0.4
+0.1
N.D.
carbon source
Casamino-acids
-0.1
-0.0
+0.3
+0.4
N.D.
carbon source
L-Arabinose
+0.1
+0.2
+0.1
+0.2
N.D.
carbon source
D-Glucose
+0.3
+0.2
+0.2
-0.0
N.D.
carbon source
Casamino-acids
+0.0
+0.1
+0.4
+0.6
N.D.
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