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Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECOR38
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500 nt
fimH and fimG are separated by 19 nucleotides
fimG and fimF are separated by 12 nucleotides
fimF and fimD are separated by 9 nucleotides
fimD and fimC are separated by 66 nucleotides
HEPCGN_09590: fimH - type 1 fimbria D-mannose specific adhesin FimH, at 658,114 to 659,016
fimH
HEPCGN_09595: fimG - type 1 fimbria minor subunit FimG, at 659,036 to 659,539
fimG
HEPCGN_09600: fimF - type 1 fimbria minor subunit FimF, at 659,552 to 660,082
fimF
HEPCGN_09605: fimD - fimbrial usher FimD, at 660,092 to 662,728
fimD
HEPCGN_09610: fimC - type 1 fimbria chaperone FimC, at 662,795 to 663,520
fimC
Group
Condition
HEPCGN
_09590
HEPCGN
_09595
HEPCGN
_09600
HEPCGN
_09605
HEPCGN
_09610
fimH
fimG
fimF
fimD
fimC
phage
TP7
+0.1
-3.5
+0.3
+0.1
-0.9
phage
TP7
-0.3
-0.2
-2.2
-0.0
-0.3
phage
K20
-0.1
-1.7
-0.5
+0.0
-0.2
phage
Bas55
-0.1
-1.4
-0.6
+0.1
-0.3
phage
Bas48
-0.2
-1.2
-0.4
+0.1
-0.2
phage
Phi92
-0.2
-0.4
-0.6
-0.3
-0.2
phage
Bas19
-0.0
-0.5
-0.1
-0.0
-0.4
phage
Phi92
-0.2
+0.4
-0.9
-0.1
-0.1
phage
Bas38
-0.1
-0.6
-0.0
+0.1
-0.3
no phage control
Control_ECOR38
-0.1
-0.2
-0.1
-0.0
-0.5
phage
RB23
+0.2
-0.2
-0.5
+0.2
-0.4
phage
Bas39
-0.0
-0.1
-0.5
+0.1
+0.1
phage
K20
-0.2
+0.2
-0.7
+0.1
+0.1
phage
Bas19
-0.2
+0.8
-0.6
-0.1
-0.4
carbon source
Sodium-DL-Lactate
+0.0
-0.7
+0.2
+0.2
+0.0
carbon source
L-Arabinose
-0.0
+0.3
-0.4
-0.0
-0.1
carbon source
L-Arabinose
+0.1
+0.0
+0.4
-0.0
-0.5
phage
Bas55
-0.1
+1.0
-0.6
+0.0
-0.2
phage
RB68
-0.2
+0.1
+0.1
+0.0
+0.1
phage
Bas38
+0.0
+0.1
+0.3
+0.1
-0.4
phage
Bas51
-0.0
+0.8
-0.7
+0.1
-0.0
carbon source
Casamino-acids
-0.0
-0.3
+0.2
-0.0
+0.5
no phage control
Control_ECOR38
-0.0
+0.3
+0.3
+0.1
-0.3
phage
RB23
+0.0
+1.0
+0.0
-0.2
-0.1
carbon source
D-Glucose
+0.1
+0.2
+0.4
+0.0
+0.1
carbon source
Sodium-DL-Lactate
-0.0
+0.5
+0.1
-0.0
+0.2
phage
Bas39
-0.1
+0.7
+0.5
+0.1
-0.3
carbon source
Casamino-acids
+0.1
+0.3
+0.4
+0.1
-0.1
phage
Bas48
-0.2
+1.3
-0.1
-0.0
-0.0
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