Fitness for 5 genes in Escherichia coli ECOR38

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500 nttatD and yjjU overlap by 4 nucleotidesyjjU and ytjA are separated by 121 nucleotidesytjA and osmY are separated by 126 nucleotidesosmY and prfC are separated by 392 nucleotides HEPCGN_09265: tatD - metal-dependent hydrolase, at 598,638 to 599,417 tatD HEPCGN_09270: yjjU - Uncharacterized protein YjjU, at 599,414 to 600,487 yjjU HEPCGN_09275: ytjA - UPF0391 membrane protein YtjA, at 600,609 to 600,770 ytjA HEPCGN_09280: osmY - molecular chaperone OsmY, at 600,897 to 601,502 osmY HEPCGN_09285: prfC - peptide chain release factor 3, at 601,895 to 603,484 prfC
Group Condition HEPCGN_09265 HEPCGN_09270 HEPCGN_09275 HEPCGN_09280 HEPCGN_09285
tatD yjjU ytjA osmY prfC
phage TP7 +0.0 +0.1 -0.8 -0.4 -0.4
phage RB23 -0.3 -0.3 -0.3 -0.2 -0.1
phage Bas55 -0.1 +0.0 +0.1 -0.9 -0.3
phage TP7 -0.0 +0.1 -0.9 -0.0 -0.2
phage Bas55 -0.3 +0.1 -0.4 -0.0 -0.4
carbon source Casamino-acids -0.0 +0.1 -0.1 -0.7 -0.2
phage Bas48 -0.0 -0.2 -0.2 -0.3 -0.2
phage Bas39 -0.0 -0.0 -0.2 -0.1 -0.4
phage RB23 -0.2 +0.0 +0.0 +0.0 -0.5
phage K20 +0.1 -0.0 -0.3 -0.4 -0.1
phage RB68 -0.1 +0.2 -0.1 -0.1 -0.7
no phage control Control_ECOR38 -0.1 -0.1 +0.0 +0.1 -0.5
carbon source Sodium-DL-Lactate +0.2 -0.2 -0.3 -0.3 -0.0
phage Bas38 -0.1 +0.0 -0.1 +0.0 -0.5
phage Bas48 -0.2 -0.1 +0.3 -0.4 -0.1
phage Bas39 -0.0 -0.0 -0.4 +0.3 -0.3
phage Bas19 -0.1 +0.1 -0.0 +0.0 -0.4
no phage control Control_ECOR38 +0.1 -0.1 -0.1 +0.1 -0.3
carbon source L-Arabinose -0.5 -0.1 +0.6 +0.0 -0.4
carbon source D-Glucose -0.2 -0.1 +0.4 -0.4 -0.0
phage Bas19 -0.2 +0.0 +0.1 +0.0 -0.2
phage Bas38 +0.0 +0.1 +0.2 +0.0 -0.5
phage Bas51 +0.3 -0.0 -0.1 +0.1 -0.3
phage K20 -0.1 -0.0 +0.6 -0.1 -0.3
carbon source Casamino-acids +0.2 +0.1 +0.1 +0.1 -0.1
carbon source Sodium-DL-Lactate +0.0 -0.2 +0.4 +0.2 -0.1
carbon source L-Arabinose +0.2 +0.0 +0.5 -0.1 -0.0
phage Phi92 -0.4 +0.1 +0.2 +0.0 +1.0
phage Phi92 -0.1 +0.3 +0.5 +0.3 +1.1
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