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Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECOR38
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Top 29 experiments (either direction), sorted by average fitness
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500 nt
pcnB and folK overlap by 4 nucleotides
folK and yadN are separated by 370 nucleotides
yadN and yadV are separated by 104 nucleotides
yadV and htrE are separated by 34 nucleotides
HEPCGN_08305: pcnB - polynucleotide adenylyltransferase PcnB, at 399,867 to 401,231
pcnB
HEPCGN_08310: folK - 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase, at 401,228 to 401,707
folK
HEPCGN_08315: yadN - Uncharacterized fimbrial-like protein YadN, at 402,078 to 402,662
yadN
HEPCGN_08320: yadV - fimbrial chaperone, at 402,767 to 403,507
yadV
HEPCGN_08325: htrE - Yad fimbria usher protein HtrE, at 403,542 to 406,037
htrE
Group
Condition
HEPCGN
_08305
HEPCGN
_08310
HEPCGN
_08315
HEPCGN
_08320
HEPCGN
_08325
pcnB
folK
yadN
yadV
htrE
carbon source
Casamino-acids
-0.8
N.D.
-0.1
-0.1
+0.1
phage
Bas51
-0.7
N.D.
-0.3
+0.1
+0.0
phage
Bas55
-0.4
N.D.
-0.1
-0.1
-0.1
phage
RB68
-0.6
N.D.
-0.2
+0.0
-0.0
phage
Bas39
-0.5
N.D.
-0.1
-0.2
-0.0
phage
Bas38
-0.6
N.D.
-0.2
-0.0
+0.0
carbon source
Sodium-DL-Lactate
-0.7
N.D.
-0.0
+0.2
-0.2
phage
Bas39
-0.6
N.D.
+0.2
-0.2
-0.1
phage
Bas38
-0.7
N.D.
-0.1
+0.1
+0.0
carbon source
L-Arabinose
-0.8
N.D.
-0.1
+0.1
+0.2
phage
Bas19
-0.3
N.D.
-0.2
-0.1
-0.0
phage
Bas48
-0.2
N.D.
-0.1
-0.1
-0.1
carbon source
Sodium-DL-Lactate
-0.3
N.D.
-0.5
+0.1
+0.2
phage
Bas55
-0.2
N.D.
-0.1
-0.2
-0.1
no phage control
Control_ECOR38
-0.3
N.D.
-0.0
-0.1
-0.0
carbon source
D-Glucose
-0.6
N.D.
-0.1
+0.0
+0.2
carbon source
L-Arabinose
-0.5
N.D.
-0.1
+0.0
+0.1
carbon source
Casamino-acids
-0.6
N.D.
+0.2
-0.0
+0.1
phage
K20
-0.5
N.D.
-0.0
+0.0
+0.2
no phage control
Control_ECOR38
-0.5
N.D.
+0.1
+0.1
-0.1
phage
K20
-0.5
N.D.
+0.2
+0.1
+0.0
phage
RB23
+0.2
N.D.
-0.3
+0.0
+0.0
phage
Bas48
-0.1
N.D.
-0.1
+0.3
-0.2
phage
Bas19
+0.1
N.D.
+0.0
+0.1
-0.1
phage
Phi92
+0.8
N.D.
-0.3
-0.3
-0.1
phage
Phi92
+0.8
N.D.
-0.3
-0.0
+0.0
phage
RB23
+0.6
N.D.
-0.1
+0.2
-0.1
phage
TP7
+2.3
N.D.
+0.2
+0.3
-0.0
phage
TP7
+2.2
N.D.
+0.1
+0.4
+0.1
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