Fitness for 5 genes in Escherichia coli ECOR38

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500 ntldcC and accA are separated by 98 nucleotidesaccA and dnaE are separated by 12 nucleotidesdnaE and rnhB are separated by 36 nucleotidesrnhB and lpxB overlap by 4 nucleotides HEPCGN_08080: ldcC - lysine decarboxylase LdcC, at 348,372 to 350,513 ldcC HEPCGN_08085: accA - acetyl-CoA carboxylase carboxyl transferase subunit alpha, at 350,612 to 351,571 accA HEPCGN_08090: dnaE - DNA polymerase III subunit alpha, at 351,584 to 355,066 dnaE HEPCGN_08095: rnhB - ribonuclease HII, at 355,103 to 355,699 rnhB HEPCGN_08100: lpxB - lipid-A-disaccharide synthase, at 355,696 to 356,844 lpxB
Group Condition HEPCGN_08080 HEPCGN_08085 HEPCGN_08090 HEPCGN_08095 HEPCGN_08100
ldcC accA dnaE rnhB lpxB
carbon source D-Glucose +0.1 N.D. N.D. -5.2 N.D.
carbon source Sodium-DL-Lactate +0.2 N.D. N.D. -5.0 N.D.
phage RB23 +0.0 N.D. N.D. -3.5 N.D.
phage RB23 +0.1 N.D. N.D. -3.3 N.D.
phage Bas48 -0.2 N.D. N.D. -1.6 N.D.
phage Bas55 +0.0 N.D. N.D. -1.5 N.D.
phage Bas51 -0.2 N.D. N.D. -1.1 N.D.
phage Phi92 +0.2 N.D. N.D. -1.3 N.D.
no phage control Control_ECOR38 -0.1 N.D. N.D. -0.7 N.D.
carbon source L-Arabinose -0.2 N.D. N.D. -0.6 N.D.
phage Bas55 +0.2 N.D. N.D. -1.0 N.D.
phage RB68 +0.1 N.D. N.D. -0.8 N.D.
carbon source L-Arabinose -0.1 N.D. N.D. -0.7 N.D.
carbon source Casamino-acids -0.0 N.D. N.D. -0.6 N.D.
phage Phi92 +0.2 N.D. N.D. -0.8 N.D.
phage Bas38 +0.0 N.D. N.D. -0.5 N.D.
phage Bas19 -0.0 N.D. N.D. -0.5 N.D.
phage Bas39 -0.0 N.D. N.D. -0.5 N.D.
carbon source Sodium-DL-Lactate +0.1 N.D. N.D. -0.3 N.D.
phage TP7 +0.1 N.D. N.D. -0.2 N.D.
phage K20 +0.1 N.D. N.D. -0.2 N.D.
phage Bas39 -0.0 N.D. N.D. -0.0 N.D.
carbon source Casamino-acids -0.1 N.D. N.D. +0.1 N.D.
phage Bas48 +0.0 N.D. N.D. +0.0 N.D.
no phage control Control_ECOR38 -0.1 N.D. N.D. +0.3 N.D.
phage Bas38 -0.1 N.D. N.D. +0.3 N.D.
phage Bas19 +0.3 N.D. N.D. +0.0 N.D.
phage K20 +0.1 N.D. N.D. +0.6 N.D.
phage TP7 +0.4 N.D. N.D. +0.6 N.D.
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