Fitness for 5 genes in Escherichia coli ECOR38

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500 ntyaeF and nlpE are separated by 29 nucleotidesnlpE and arfB are separated by 13 nucleotidesarfB and yaeQ overlap by 4 nucleotidesyaeQ and yaeP are separated by 165 nucleotides HEPCGN_08040: yaeF - YaeF family permuted papain-like enzyme, at 343,380 to 344,183 yaeF HEPCGN_08045: nlpE - envelope stress response activation lipoprotein NlpE, at 344,213 to 344,923 nlpE HEPCGN_08050: arfB - aminoacyl-tRNA hydrolase, at 344,937 to 345,359 arfB HEPCGN_08055: yaeQ - Uncharacterized protein YaeQ, at 345,356 to 345,901 yaeQ HEPCGN_08060: yaeP - YaeP family protein, at 346,067 to 346,267 yaeP
Group Condition HEPCGN_08040 HEPCGN_08045 HEPCGN_08050 HEPCGN_08055 HEPCGN_08060
yaeF nlpE arfB yaeQ yaeP
phage Bas48 -0.1 -0.1 -0.4 +0.1 -1.8
phage TP7 -0.1 -0.6 +0.3 -0.3 -1.2
phage Bas55 -0.1 -0.3 -1.1 -0.2 +0.2
phage Bas19 -0.1 -0.2 -0.4 -0.1 -0.5
phage RB23 -0.1 -0.1 -0.4 -0.3 -0.0
phage RB23 +0.2 -0.2 -0.5 -0.0 -0.3
phage Bas48 +0.2 -0.3 -0.4 +0.2 -0.3
phage RB68 +0.1 +0.3 -0.3 +0.0 -0.6
phage K20 +0.1 -0.1 -0.6 -0.2 +0.2
phage Phi92 -0.1 -0.1 -0.0 +0.5 -0.7
phage Bas19 -0.2 -0.2 -0.0 +0.2 -0.2
phage Bas55 +0.3 +0.0 -0.2 +0.3 -0.8
carbon source Sodium-DL-Lactate +0.1 -0.2 +0.0 +0.1 -0.2
phage TP7 +0.1 -0.2 -0.0 -0.3 +0.3
phage K20 +0.0 -0.2 +0.2 +0.1 -0.3
no phage control Control_ECOR38 -0.1 +0.1 +0.0 +0.1 -0.2
carbon source L-Arabinose -0.0 -0.3 +0.5 -0.3 +0.2
phage Phi92 -0.1 -0.3 +0.2 -0.0 +0.3
phage Bas51 -0.1 -0.1 +0.1 +0.1 +0.2
phage Bas38 +0.1 +0.2 -0.1 +0.1 -0.0
carbon source Casamino-acids +0.1 +0.1 +0.3 -0.0 -0.3
phage Bas39 -0.1 +0.1 -0.0 +0.2 +0.3
phage Bas38 -0.1 -0.1 +0.0 +0.3 +0.3
no phage control Control_ECOR38 -0.0 -0.1 +0.2 +0.1 +0.3
carbon source L-Arabinose +0.2 +0.0 +0.4 +0.4 -0.5
carbon source Sodium-DL-Lactate +0.2 -0.0 +0.5 -0.0 +0.2
carbon source Casamino-acids +0.2 +0.1 +0.2 +0.2 +0.1
carbon source D-Glucose +0.2 -0.1 +0.4 +0.3 +0.3
phage Bas39 +0.1 -0.0 +0.6 +0.1 +0.7
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