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Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECOR38
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Top 29 experiments (either direction), sorted by average fitness
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500 nt
yafS and gloB are separated by 33 nucleotides
gloB and mltD are separated by 209 nucleotides
mltD and ubiE are separated by 48 nucleotides
ubiE and yafD are separated by 76 nucleotides
HEPCGN_07915: yafS - Uncharacterized protein YafS, at 321,207 to 321,929
yafS
HEPCGN_07920: gloB - hydroxyacylglutathione hydrolase, at 321,963 to 322,718
gloB
HEPCGN_07925: mltD - murein transglycosylase D, at 322,928 to 324,148
mltD
HEPCGN_07930: ubiE - SAM-dependent methyltransferase, at 324,197 to 324,967
ubiE
HEPCGN_07935: yafD - endonuclease/exonuclease/phosphatase family protein, at 325,044 to 325,823
yafD
Group
Condition
HEPCGN
_07915
HEPCGN
_07920
HEPCGN
_07925
HEPCGN
_07930
HEPCGN
_07935
yafS
gloB
mltD
ubiE
yafD
phage
Phi92
-0.2
-0.4
+0.0
-0.0
-0.8
no phage control
Control_ECOR38
-0.3
-0.1
-0.1
-0.0
+0.0
no phage control
Control_ECOR38
-0.3
-0.1
+0.0
-0.0
-0.0
phage
Bas38
-0.1
-0.1
-0.1
-0.3
+0.1
phage
Bas48
-0.2
-0.1
+0.1
-0.1
+0.1
carbon source
L-Arabinose
+0.1
-0.4
+0.1
+0.1
-0.1
carbon source
L-Arabinose
-0.1
-0.2
+0.1
+0.0
+0.0
phage
Bas51
+0.0
-0.1
-0.2
+0.0
+0.1
phage
Bas39
-0.1
-0.1
+0.1
-0.0
+0.0
phage
K20
-0.1
-0.0
-0.1
+0.0
-0.0
phage
RB68
+0.0
-0.2
-0.0
-0.1
+0.2
carbon source
Sodium-DL-Lactate
+0.0
-0.3
-0.1
+0.1
+0.1
phage
Bas39
+0.0
-0.1
-0.1
-0.1
+0.2
phage
Bas55
-0.2
+0.0
-0.0
-0.1
+0.2
phage
Bas48
-0.1
-0.2
+0.1
-0.1
+0.2
phage
Bas38
-0.0
-0.0
-0.1
+0.2
+0.0
carbon source
D-Glucose
-0.0
+0.0
+0.0
+0.1
-0.1
carbon source
Casamino-acids
+0.2
-0.0
-0.1
-0.2
+0.1
phage
Bas55
-0.1
-0.0
+0.0
+0.3
+0.0
phage
K20
+0.0
+0.0
+0.0
+0.1
+0.1
carbon source
Sodium-DL-Lactate
-0.3
+0.2
-0.0
+0.3
+0.2
phage
Phi92
+0.6
+0.0
+0.2
-0.2
-0.1
carbon source
Casamino-acids
+0.3
-0.1
+0.1
-0.0
+0.2
phage
Bas19
-0.1
+0.1
+0.3
-0.1
+0.4
phage
RB23
-0.1
-0.1
+0.3
+0.0
+0.5
phage
Bas19
+0.1
-0.1
+0.4
-0.0
+0.4
phage
TP7
+0.4
-0.5
+0.4
-0.4
+1.0
phage
RB23
+0.1
+0.0
+0.4
-0.3
+0.6
phage
TP7
+0.1
+0.2
+0.5
-0.2
+0.9
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