Private Fitness
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECOR38
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 29 experiments (either direction), sorted by average fitness
Or view
all 29 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
gpt and pepD are separated by 260 nucleotides
pepD and prfH are separated by 56 nucleotides
prfH and rtcB overlap by 4 nucleotides
rtcB and yafP are separated by 190 nucleotides
HEPCGN_07800: gpt - xanthine phosphoribosyltransferase, at 302,690 to 303,148
gpt
HEPCGN_07805: pepD - cytosol nonspecific dipeptidase, at 303,409 to 304,866
pepD
HEPCGN_07810: prfH - peptide chain release factor H, at 304,923 to 305,537
prfH
HEPCGN_07815: rtcB - RNA ligase RtcB family protein, at 305,534 to 306,673
rtcB
HEPCGN_07820: yafP - GNAT family N-acetyltransferase, at 306,864 to 307,316
yafP
Group
Condition
HEPCGN
_07800
HEPCGN
_07805
HEPCGN
_07810
HEPCGN
_07815
HEPCGN
_07820
gpt
pepD
prfH
rtcB
yafP
carbon source
D-Glucose
-0.4
+0.1
-1.1
+0.2
-0.5
phage
Bas19
-0.5
+0.3
-0.7
-0.1
-0.2
phage
TP7
-1.0
+0.1
-0.3
-0.3
+0.4
phage
Bas55
-1.7
+0.1
-0.0
+0.4
+0.3
phage
Bas19
-0.2
-0.1
-0.7
-0.1
+0.2
phage
Bas48
-0.6
+0.0
-0.0
-0.1
-0.1
phage
K20
-0.8
+0.2
-0.2
+0.1
+0.0
carbon source
L-Arabinose
-0.3
+0.1
-0.7
+0.1
+0.2
phage
Bas55
-0.5
-0.1
+0.0
+0.0
-0.1
phage
RB68
-0.3
+0.0
-0.1
-0.2
-0.1
no phage control
Control_ECOR38
-0.1
-0.2
-0.3
-0.0
+0.1
carbon source
Casamino-acids
-0.6
-0.0
+0.1
+0.0
+0.0
phage
Bas51
-0.0
-0.3
+0.0
-0.1
+0.0
phage
Bas39
-0.2
+0.1
-0.1
-0.1
-0.0
carbon source
Sodium-DL-Lactate
-0.6
+0.0
+0.2
-0.0
+0.1
phage
Bas38
+0.5
-0.3
-0.3
-0.0
-0.1
phage
RB23
-0.2
+0.2
-0.0
-0.1
+0.0
phage
Phi92
-0.2
+0.4
-0.2
-0.0
-0.0
phage
K20
-0.2
-0.0
-0.1
-0.0
+0.3
phage
Bas39
+0.3
-0.2
-0.3
+0.1
+0.2
carbon source
Casamino-acids
-0.1
-0.0
+0.2
+0.1
-0.2
phage
Bas38
+0.4
-0.2
+0.0
-0.1
+0.0
phage
RB23
+0.0
-0.0
+0.3
+0.0
-0.1
carbon source
L-Arabinose
-0.5
+0.4
+0.4
+0.0
-0.1
carbon source
Sodium-DL-Lactate
+0.1
-0.1
+0.5
+0.0
-0.0
no phage control
Control_ECOR38
+0.1
+0.1
+0.2
+0.1
+0.1
phage
Phi92
+0.5
+0.1
+0.2
-0.2
+0.1
phage
Bas48
+0.6
-0.0
+0.4
+0.2
-0.0
phage
TP7
-0.2
+0.7
+0.4
-0.1
+0.5
remove
HEPCGN_07800
plot
remove
HEPCGN_07805
plot
remove
HEPCGN_07810
remove
HEPCGN_07815
plot
remove
HEPCGN_07820
plot