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Cofit
Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECOR38
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Top 29 experiments (either direction), sorted by average fitness
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500 nt
mhpA and mhpR are separated by 190 nucleotides
mhpR and lacI are separated by 67 nucleotides
lacI and lacZ are separated by 122 nucleotides
lacZ and lacY are separated by 51 nucleotides
HEPCGN_07410: mhpA - bifunctional 3-(3-hydroxy-phenyl)propionate/3-hydroxycinnamic acid hydroxylase, at 215,604 to 217,268
mhpA
HEPCGN_07415: mhpR - DNA-binding transcriptional regulator, at 217,459 to 218,292
mhpR
HEPCGN_07420: lacI - DNA-binding transcriptional repressor LacI, at 218,360 to 219,451
lacI
HEPCGN_07425: lacZ - beta-galactosidase, at 219,574 to 222,648
lacZ
HEPCGN_07430: lacY - lactose permease, at 222,700 to 223,953
lacY
Group
Condition
HEPCGN
_07410
HEPCGN
_07415
HEPCGN
_07420
HEPCGN
_07425
HEPCGN
_07430
mhpA
mhpR
lacI
lacZ
lacY
phage
Bas48
-0.0
-0.5
-1.2
+0.2
-0.2
phage
TP7
-0.3
-0.2
-0.8
+0.2
+0.1
phage
Bas19
-0.3
-0.2
-0.3
-0.1
-0.2
phage
Bas19
-0.2
-0.3
-0.3
-0.1
-0.0
phage
K20
-0.2
-0.2
-0.1
-0.1
-0.2
phage
K20
-0.1
-0.1
-0.6
+0.0
-0.1
no phage control
Control_ECOR38
-0.0
-0.1
-0.3
-0.0
-0.1
phage
Bas38
+0.0
-0.4
-0.2
-0.0
+0.0
phage
Bas55
+0.0
-0.2
-0.3
+0.1
-0.0
carbon source
L-Arabinose
-0.2
-0.0
-0.1
-0.0
-0.1
phage
Bas55
+0.0
-0.1
-0.3
+0.1
+0.0
phage
RB23
-0.3
+0.1
-0.2
+0.2
+0.0
phage
Bas38
-0.0
+0.2
-0.4
+0.0
-0.0
phage
Bas48
-0.1
-0.1
+0.4
-0.1
-0.3
phage
RB68
-0.0
-0.1
-0.1
+0.0
+0.0
phage
Bas51
+0.0
+0.2
-0.3
-0.1
+0.0
phage
Bas39
-0.0
-0.0
-0.0
-0.0
+0.0
carbon source
Casamino-acids
-0.1
+0.0
+0.0
+0.1
-0.0
no phage control
Control_ECOR38
-0.0
+0.1
+0.2
-0.2
-0.0
phage
Phi92
-0.0
-0.5
+0.6
-0.1
+0.2
carbon source
Casamino-acids
-0.0
-0.0
+0.0
+0.1
+0.0
phage
Phi92
-0.1
+0.0
+0.5
-0.3
+0.1
carbon source
L-Arabinose
+0.0
-0.0
+0.0
+0.1
+0.0
carbon source
Sodium-DL-Lactate
+0.1
+0.1
-0.2
-0.0
+0.2
carbon source
Sodium-DL-Lactate
+0.0
+0.3
-0.0
+0.0
-0.1
phage
RB23
+0.0
+0.0
+0.2
-0.1
+0.0
phage
TP7
-0.0
-0.2
+0.5
+0.1
-0.0
carbon source
D-Glucose
-0.0
+0.1
+0.3
+0.0
+0.0
phage
Bas39
-0.1
+0.3
+0.1
+0.0
+0.1
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