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Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECOR38
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500 nt
adrA and psiF are separated by 101 nucleotides
psiF and phoA are separated by 118 nucleotides
phoA and iraP are separated by 99 nucleotides
iraP and ddlA are separated by 462 nucleotides
HEPCGN_07255: adrA - diguanylate cyclase AdrA, at 184,325 to 185,440
adrA
HEPCGN_07260: psiF - phosphate starvation-inducible protein PsiF, at 185,542 to 185,862
psiF
HEPCGN_07265: phoA - alkaline phosphatase, at 185,981 to 187,396
phoA
HEPCGN_07270: iraP - anti-adapter protein IraP, at 187,496 to 187,756
iraP
HEPCGN_07275: ddlA - D-alanine--D-alanine ligase, at 188,219 to 189,313
ddlA
Group
Condition
HEPCGN
_07255
HEPCGN
_07260
HEPCGN
_07265
HEPCGN
_07270
HEPCGN
_07275
adrA
psiF
phoA
iraP
ddlA
phage
Bas19
-0.2
-0.2
+0.1
-1.2
-0.1
phage
Bas19
+0.1
-0.4
+0.3
-1.0
+0.0
phage
Phi92
-0.0
-0.4
+0.1
-0.8
+0.1
phage
Phi92
-0.3
-0.8
+0.2
+0.2
-0.1
phage
K20
-0.0
+0.1
-0.0
-0.6
-0.1
phage
TP7
+0.2
-0.7
+0.2
-0.1
-0.2
phage
Bas55
-0.3
-0.2
+0.1
-0.2
+0.0
phage
Bas48
+0.1
-0.5
-0.1
+0.2
-0.1
carbon source
L-Arabinose
-0.1
+0.1
+0.1
-0.5
-0.1
carbon source
Casamino-acids
-0.0
-0.0
+0.0
-0.2
-0.2
no phage control
Control_ECOR38
-0.0
+0.0
-0.1
-0.0
-0.3
phage
Bas38
-0.1
+0.1
-0.2
-0.1
+0.1
phage
Bas48
-0.0
-0.5
+0.1
+0.2
+0.1
phage
TP7
-0.2
+0.4
+0.2
-0.5
+0.1
phage
RB68
-0.1
-0.2
+0.3
+0.1
-0.2
phage
Bas39
+0.1
-0.1
-0.0
-0.1
+0.0
no phage control
Control_ECOR38
-0.1
-0.2
+0.0
+0.1
-0.0
phage
Bas51
+0.1
-0.3
-0.2
+0.6
-0.2
phage
Bas55
-0.0
-0.7
+0.1
+0.5
-0.0
carbon source
Casamino-acids
+0.2
+0.0
-0.1
+0.1
-0.1
carbon source
D-Glucose
+0.0
-0.2
+0.1
+0.1
+0.1
carbon source
Sodium-DL-Lactate
-0.1
-0.2
+0.3
+0.3
-0.2
phage
K20
-0.1
-0.4
+0.2
+0.6
-0.1
phage
RB23
-0.1
-0.3
+0.0
+0.6
+0.1
phage
RB23
-0.1
+0.1
+0.4
-0.0
+0.1
phage
Bas39
+0.0
-0.1
-0.1
+0.5
+0.1
phage
Bas38
-0.1
-0.1
-0.0
+0.9
-0.2
carbon source
Sodium-DL-Lactate
-0.1
+0.0
+0.1
+0.6
-0.1
carbon source
L-Arabinose
+0.1
-0.0
+0.2
+0.5
+0.0
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