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Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECOR38
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Top 29 experiments (either direction), sorted by average fitness
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500 nt
mlc and bioD are separated by 124 nucleotides
bioD and clcB overlap by 48 nucleotides
clcB and HEPCGN_06130 are separated by 39 nucleotides
HEPCGN_06130 and dmsD are separated by 193 nucleotides
HEPCGN_06115: mlc - DNA-binding transcriptional repressor Mlc, at 1,097,988 to 1,099,208
mlc
HEPCGN_06120: bioD - dethiobiotin synthase, at 1,099,333 to 1,100,028
bioD
HEPCGN_06125: clcB - voltage-gated ClC-type chloride channel ClcB, at 1,099,981 to 1,100,772
clcB
HEPCGN_06130: HEPCGN_06130 - Putative voltage-gated ClC-type chloride channel ClcB, at 1,100,812 to 1,101,237
_06130
HEPCGN_06135: dmsD - Tat proofreading chaperone DmsD, at 1,101,431 to 1,102,045
dmsD
Group
Condition
HEPCGN
_06115
HEPCGN
_06120
HEPCGN
_06125
HEPCGN
_06130
HEPCGN
_06135
mlc
bioD
clcB
dmsD
phage
RB23
-0.2
-0.5
+0.0
-1.1
-0.5
phage
Bas48
-1.4
-0.1
-0.2
+0.0
-0.5
phage
Bas39
-0.9
-0.3
-0.2
+0.2
-0.4
phage
RB23
-0.7
-0.6
+0.1
-0.4
+0.4
phage
Bas55
-0.4
-0.3
-0.1
+0.3
-0.7
no phage control
Control_ECOR38
-0.3
+0.2
-0.0
-0.5
-0.5
phage
Phi92
-0.0
+0.5
+0.1
-0.5
-0.9
phage
Bas51
-0.8
-0.1
-0.0
-0.0
+0.1
phage
Bas48
-0.8
-0.4
-0.0
+0.9
-0.4
phage
K20
-0.0
+0.3
+0.2
-0.3
-0.8
phage
Bas38
-0.4
+0.1
-0.1
+0.2
-0.5
phage
Bas39
-0.5
+0.1
-0.2
+0.1
-0.1
carbon source
Sodium-DL-Lactate
-0.0
+0.2
+0.1
-0.2
-0.5
phage
Phi92
+0.2
+0.2
+0.0
-0.1
-0.8
phage
TP7
-0.6
-0.9
-0.2
+0.8
+0.4
carbon source
Casamino-acids
-0.4
-0.3
-0.0
+0.4
+0.0
phage
Bas19
-0.0
-0.3
+0.0
+0.8
-0.8
phage
RB68
-0.2
+0.2
+0.2
+0.9
-1.1
no phage control
Control_ECOR38
-0.3
+0.2
-0.2
+0.6
-0.2
carbon source
L-Arabinose
-0.1
-0.3
+0.2
-0.4
+0.8
phage
Bas55
-0.3
+0.2
+0.2
+0.6
-0.3
phage
Bas38
-0.2
+0.4
-0.3
+0.0
+0.5
phage
TP7
-0.2
-0.2
-0.1
+0.7
+0.4
phage
K20
-0.1
+0.5
+0.1
+0.3
-0.1
carbon source
Casamino-acids
-0.3
-0.1
+0.0
+0.3
+0.7
carbon source
D-Glucose
+0.5
-0.2
-0.0
+0.1
+0.5
carbon source
L-Arabinose
+0.3
-0.4
+0.2
+0.6
+0.3
phage
Bas19
-0.4
+0.3
+0.3
+0.7
+0.3
carbon source
Sodium-DL-Lactate
-0.1
-0.4
-0.1
+0.9
+1.2
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