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Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECOR38
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Top 29 experiments (either direction), sorted by average fitness
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500 nt
rsxD and rsxC are separated by 0 nucleotides
rsxC and rsxB overlap by 8 nucleotides
rsxB and rsxA overlap by 1 nucleotides
rsxA and ydgK are separated by 76 nucleotides
HEPCGN_05925: rsxD - electron transport complex subunit RsxD, at 1,055,091 to 1,056,149
rsxD
HEPCGN_05930: rsxC - electron transport complex subunit RsxC, at 1,056,150 to 1,058,372
rsxC
HEPCGN_05935: rsxB - electron transport complex subunit RsxB, at 1,058,365 to 1,058,943
rsxB
HEPCGN_05940: rsxA - electron transport complex subunit RsxA, at 1,058,943 to 1,059,524
rsxA
HEPCGN_05945: ydgK - Inner membrane protein YdgK, at 1,059,601 to 1,060,041
ydgK
Group
Condition
HEPCGN
_05925
HEPCGN
_05930
HEPCGN
_05935
HEPCGN
_05940
HEPCGN
_05945
rsxD
rsxC
rsxB
rsxA
ydgK
phage
TP7
-4.4
-4.1
-3.7
-4.1
+0.3
phage
TP7
-3.5
-4.1
-4.0
-2.9
-0.4
phage
RB23
-3.2
-3.1
-3.3
-3.1
+0.2
phage
RB23
-2.7
-2.2
-2.7
-1.5
-0.3
phage
Bas19
-2.3
-2.0
-2.1
-3.1
+0.2
phage
Bas19
-2.1
-2.2
-1.6
-2.9
+0.2
phage
Bas48
-2.2
-2.2
-2.0
-2.0
-0.2
phage
Bas48
-2.8
-1.5
-0.9
-1.8
-0.2
phage
Bas55
-0.8
-0.8
-1.4
-0.7
-0.5
phage
Bas55
-1.1
-0.8
-1.3
-0.1
+0.0
phage
K20
-0.5
-0.2
-0.1
-0.6
-0.4
phage
K20
-0.0
-0.4
-0.6
-0.9
+0.3
phage
RB68
-0.1
-0.2
-0.5
-0.3
+0.0
phage
Bas51
-0.3
-0.3
-0.4
-0.1
+0.2
carbon source
Sodium-DL-Lactate
+0.0
-0.3
+0.2
-0.3
-0.6
carbon source
Casamino-acids
-0.1
-0.0
-0.5
+0.0
-0.2
phage
Bas38
-0.4
-0.2
+0.2
-0.5
+0.3
phage
Bas39
-0.2
-0.3
+0.0
-0.6
+0.4
carbon source
Sodium-DL-Lactate
-0.4
-0.1
-0.1
+0.1
-0.2
phage
Bas39
-0.1
-0.2
-0.1
-0.3
+0.1
phage
Bas38
-0.3
-0.1
+0.4
-0.5
+0.1
no phage control
Control_ECOR38
+0.1
-0.2
+0.1
-0.4
+0.3
no phage control
Control_ECOR38
-0.1
+0.0
+0.0
-0.4
+0.5
carbon source
D-Glucose
+0.1
-0.1
+0.5
-0.0
-0.0
carbon source
Casamino-acids
+0.1
+0.2
+0.1
+0.2
-0.1
carbon source
L-Arabinose
+0.1
-0.2
-0.1
+0.6
+0.2
carbon source
L-Arabinose
+0.1
+0.0
+0.1
+0.6
-0.1
phage
Phi92
+1.4
+1.2
+1.0
+0.8
+0.3
phage
Phi92
+1.3
+1.1
+1.6
+1.3
-0.1
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