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Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECOR38
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500 nt
cho and nadE are separated by 229 nucleotides
nadE and osmE are separated by 201 nucleotides
osmE and chbB are separated by 298 nucleotides
chbB and chbC are separated by 84 nucleotides
HEPCGN_05305: cho - excinuclease Cho, at 937,409 to 938,296
cho
HEPCGN_05315: nadE - ammonia-dependent NAD(+) synthetase, at 938,526 to 939,353
nadE
HEPCGN_05320: osmE - osmotically-inducible lipoprotein OsmE, at 939,555 to 939,893
osmE
HEPCGN_05325: chbB - PTS N,N'-diacetylchitobiose transporter subunit IIB, at 940,192 to 940,512
chbB
HEPCGN_05330: chbC - PTS N,N'-diacetylchitobiose transporter subunit IIC, at 940,597 to 941,955
chbC
Group
Condition
HEPCGN
_05305
HEPCGN
_05315
HEPCGN
_05320
HEPCGN
_05325
HEPCGN
_05330
cho
nadE
osmE
chbB
chbC
phage
TP7
-0.0
N.D.
-0.9
+0.4
-0.8
phage
Bas48
-0.2
N.D.
-0.3
-0.4
-0.2
carbon source
Casamino-acids
-0.0
N.D.
+0.2
-0.5
-0.5
phage
TP7
-0.2
N.D.
+0.3
-0.4
-0.5
carbon source
L-Arabinose
-0.3
N.D.
-0.0
-0.0
-0.3
phage
K20
-0.0
N.D.
+0.1
-0.3
-0.3
phage
Bas19
-0.5
N.D.
-0.1
+0.1
-0.1
phage
Bas39
-0.1
N.D.
-0.1
-0.2
+0.0
no phage control
Control_ECOR38
-0.0
N.D.
-0.1
-0.2
-0.1
phage
RB68
-0.2
N.D.
-0.0
+0.2
-0.1
carbon source
L-Arabinose
-0.0
N.D.
+0.6
-0.0
-0.6
phage
RB23
-0.3
N.D.
+0.0
+0.3
-0.1
phage
RB23
-0.1
N.D.
+0.1
+0.1
-0.0
phage
Phi92
+0.1
N.D.
+0.1
-0.6
+0.5
phage
Bas48
-0.1
N.D.
-0.1
+0.4
-0.1
phage
Bas55
-0.3
N.D.
+0.1
+0.4
-0.1
phage
Bas39
+0.3
N.D.
-0.1
+0.1
-0.1
phage
K20
-0.1
N.D.
+0.1
+0.1
+0.1
phage
Bas38
+0.4
N.D.
-0.2
+0.0
+0.0
carbon source
Casamino-acids
-0.1
N.D.
+0.2
+0.4
-0.2
phage
Bas19
+0.1
N.D.
-0.1
+0.1
+0.4
carbon source
Sodium-DL-Lactate
+0.2
N.D.
+0.4
-0.2
+0.1
carbon source
Sodium-DL-Lactate
-0.0
N.D.
+0.5
+0.1
-0.1
no phage control
Control_ECOR38
+0.1
N.D.
+0.0
+0.2
+0.3
phage
Bas38
+0.1
N.D.
-0.0
+0.3
+0.2
phage
Phi92
+0.2
N.D.
+0.1
+0.3
+0.1
phage
Bas51
+0.3
N.D.
-0.0
+0.4
+0.0
carbon source
D-Glucose
+0.3
N.D.
+0.3
+0.1
-0.0
phage
Bas55
-0.2
N.D.
+0.0
+0.5
+0.4
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