Private Fitness
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECOR38
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 29 experiments (either direction), sorted by average fitness
Or view
all 29 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
astD and astB overlap by 4 nucleotides
astB and astE overlap by 8 nucleotides
astE and spy are separated by 329 nucleotides
spy and ves are separated by 202 nucleotides
HEPCGN_05280: astD - succinylglutamate-semialdehyde dehydrogenase, at 932,077 to 933,555
astD
HEPCGN_05285: astB - N-succinylarginine dihydrolase, at 933,552 to 934,895
astB
HEPCGN_05290: astE - succinylglutamate desuccinylase, at 934,888 to 935,856
astE
HEPCGN_05295: spy - ATP-independent periplasmic protein-refolding chaperone Spy, at 936,186 to 936,671
spy
HEPCGN_05300: ves - environmental stress-induced protein Ves, at 936,874 to 937,449
ves
Group
Condition
HEPCGN
_05280
HEPCGN
_05285
HEPCGN
_05290
HEPCGN
_05295
HEPCGN
_05300
astD
astB
astE
spy
ves
phage
K20
+0.0
+0.1
-0.0
-1.5
-0.9
phage
Bas51
-0.7
-0.8
-0.4
-0.0
+0.1
phage
Bas19
+0.3
-0.2
-0.1
-0.8
-0.5
phage
Bas39
-0.5
-0.5
-0.3
-0.5
+0.4
phage
Phi92
+0.3
+0.3
-0.4
-0.4
-0.7
phage
Bas55
+0.5
+0.3
+0.0
-0.1
-1.7
carbon source
Casamino-acids
-0.2
-0.0
+0.3
-0.3
-0.6
carbon source
L-Arabinose
-0.3
-0.1
+0.2
-0.8
+0.2
phage
Bas38
+0.1
-0.2
-0.1
-0.4
-0.2
phage
RB23
-0.2
+0.0
-0.2
-0.3
-0.2
phage
TP7
+0.2
+0.3
-0.1
-0.4
-0.6
phage
Bas48
+0.3
-0.1
-0.5
-0.2
-0.1
carbon source
L-Arabinose
-0.4
+0.1
-0.2
-0.3
+0.2
phage
RB23
+0.3
-0.2
-0.3
+0.0
-0.3
phage
Bas19
+0.3
+0.1
-0.4
-0.2
-0.4
phage
Phi92
-0.3
+0.8
-0.9
+0.4
-0.4
phage
K20
+0.3
-0.1
+0.2
-0.5
-0.4
phage
Bas39
+0.1
-0.2
-0.2
-0.0
-0.2
carbon source
D-Glucose
-0.1
-0.1
-0.4
+0.2
-0.1
carbon source
Sodium-DL-Lactate
-0.0
-0.1
-0.4
+0.2
-0.1
carbon source
Sodium-DL-Lactate
-0.2
-0.0
-0.7
+0.4
+0.2
phage
Bas55
+0.2
-0.0
-0.1
+0.1
-0.5
no phage control
Control_ECOR38
+0.2
+0.0
-0.0
-0.6
+0.2
no phage control
Control_ECOR38
-0.4
-0.3
-0.2
+0.7
+0.1
phage
RB68
+0.3
-0.0
+0.1
+0.0
-0.3
phage
Bas38
+0.2
+0.0
-0.0
-0.2
+0.2
phage
TP7
+0.2
+0.5
+0.4
-0.4
-0.2
carbon source
Casamino-acids
+0.0
-0.1
-0.0
+0.7
+0.3
phage
Bas48
+0.2
+0.3
+0.2
+1.0
+0.0
remove
HEPCGN_05280
plot
remove
HEPCGN_05285
plot
remove
HEPCGN_05290
remove
HEPCGN_05295
plot
remove
HEPCGN_05300
plot