Private Fitness
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECOR38
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 29 experiments (either direction), sorted by average fitness
Or view
all 29 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
astA and astD overlap by 4 nucleotides
astD and astB overlap by 4 nucleotides
astB and astE overlap by 8 nucleotides
astE and spy are separated by 329 nucleotides
HEPCGN_05275: astA - arginine N-succinyltransferase, at 931,046 to 932,080
astA
HEPCGN_05280: astD - succinylglutamate-semialdehyde dehydrogenase, at 932,077 to 933,555
astD
HEPCGN_05285: astB - N-succinylarginine dihydrolase, at 933,552 to 934,895
astB
HEPCGN_05290: astE - succinylglutamate desuccinylase, at 934,888 to 935,856
astE
HEPCGN_05295: spy - ATP-independent periplasmic protein-refolding chaperone Spy, at 936,186 to 936,671
spy
Group
Condition
HEPCGN
_05275
HEPCGN
_05280
HEPCGN
_05285
HEPCGN
_05290
HEPCGN
_05295
astA
astD
astB
astE
spy
phage
Bas39
-0.4
-0.5
-0.5
-0.3
-0.5
phage
Bas51
-0.1
-0.7
-0.8
-0.4
-0.0
phage
K20
-0.0
+0.0
+0.1
-0.0
-1.5
carbon source
L-Arabinose
-0.2
-0.3
-0.1
+0.2
-0.8
phage
Bas19
-0.1
+0.3
-0.2
-0.1
-0.8
carbon source
L-Arabinose
+0.1
-0.4
+0.1
-0.2
-0.3
carbon source
Sodium-DL-Lactate
-0.3
-0.2
-0.0
-0.7
+0.4
carbon source
Sodium-DL-Lactate
-0.3
-0.0
-0.1
-0.4
+0.2
phage
Bas48
-0.1
+0.3
-0.1
-0.5
-0.2
phage
Bas38
+0.0
+0.1
-0.2
-0.1
-0.4
phage
RB23
+0.0
-0.2
+0.0
-0.2
-0.3
no phage control
Control_ECOR38
-0.4
-0.4
-0.3
-0.2
+0.7
no phage control
Control_ECOR38
-0.1
+0.2
+0.0
-0.0
-0.6
carbon source
D-Glucose
-0.1
-0.1
-0.1
-0.4
+0.2
phage
Bas39
-0.1
+0.1
-0.2
-0.2
-0.0
phage
Phi92
+0.1
+0.3
+0.3
-0.4
-0.4
carbon source
Casamino-acids
+0.1
-0.2
-0.0
+0.3
-0.3
phage
Phi92
-0.1
-0.3
+0.8
-0.9
+0.4
phage
K20
-0.1
+0.3
-0.1
+0.2
-0.5
phage
Bas19
+0.1
+0.3
+0.1
-0.4
-0.2
phage
RB23
+0.2
+0.3
-0.2
-0.3
+0.0
phage
Bas38
+0.0
+0.2
+0.0
-0.0
-0.2
phage
TP7
+0.1
+0.2
+0.3
-0.1
-0.4
phage
Bas55
-0.0
+0.2
-0.0
-0.1
+0.1
phage
RB68
+0.1
+0.3
-0.0
+0.1
+0.0
phage
TP7
-0.0
+0.2
+0.5
+0.4
-0.4
carbon source
Casamino-acids
+0.1
+0.0
-0.1
-0.0
+0.7
phage
Bas55
+0.1
+0.5
+0.3
+0.0
-0.1
phage
Bas48
+0.2
+0.2
+0.3
+0.2
+1.0
remove
HEPCGN_05275
plot
remove
HEPCGN_05280
plot
remove
HEPCGN_05285
remove
HEPCGN_05290
plot
remove
HEPCGN_05295
plot