Fitness for 5 genes in Escherichia coli ECOR38

Add gene:

Number of genes on each side:  

Top 29 experiments (either direction), sorted by average fitness

Or view all 29 experiments or choose conditions or try the comparative fitness browser

500 ntyoaA and tsaB are separated by 57 nucleotidestsaB and yeaY are separated by 38 nucleotidesyeaY and fadD are separated by 138 nucleotidesfadD and rnd are separated by 81 nucleotides HEPCGN_04970: yoaA - putative ATP-dependent DNA helicase YoaA, at 869,568 to 871,478 yoaA HEPCGN_04975: tsaB - tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB, at 871,536 to 872,231 tsaB HEPCGN_04980: yeaY - Slp family lipoprotein YeaY, at 872,270 to 872,851 yeaY HEPCGN_04985: fadD - long-chain-fatty-acid--CoA ligase FadD, at 872,990 to 874,741 fadD HEPCGN_04995: rnd - ribonuclease D, at 874,823 to 875,938 rnd
Group Condition HEPCGN_04970 HEPCGN_04975 HEPCGN_04980 HEPCGN_04985 HEPCGN_04995
yoaA tsaB yeaY fadD rnd
phage Phi92 -0.2 N.D. -0.1 -0.2 -1.7
phage Phi92 -0.4 N.D. -0.1 +0.2 -1.8
carbon source L-Arabinose -0.2 N.D. -0.2 -0.4 +0.2
phage TP7 +0.1 N.D. -0.2 +0.3 -0.6
carbon source Sodium-DL-Lactate -0.0 N.D. -0.1 -0.4 +0.1
phage Bas48 +0.1 N.D. +0.3 -0.0 -0.8
phage Bas55 -0.2 N.D. +0.3 -0.2 -0.2
no phage control Control_ECOR38 -0.4 N.D. -0.1 -0.0 +0.3
carbon source Casamino-acids -0.1 N.D. +0.0 -0.1 +0.1
carbon source Casamino-acids +0.0 N.D. -0.1 +0.0 +0.1
phage Bas48 -0.2 N.D. +0.3 +0.3 -0.2
phage Bas19 -0.2 N.D. -0.4 +0.4 +0.4
phage Bas38 +0.1 N.D. -0.1 -0.0 +0.2
phage TP7 -0.5 N.D. +0.6 +0.2 -0.0
no phage control Control_ECOR38 +0.3 N.D. -0.1 +0.0 +0.0
phage RB23 +0.1 N.D. +0.4 +0.0 -0.3
phage Bas51 +0.1 N.D. -0.1 +0.1 +0.2
phage Bas55 -0.2 N.D. +0.5 +0.2 -0.2
phage Bas38 -0.0 N.D. +0.2 +0.1 +0.1
carbon source L-Arabinose -0.0 N.D. +0.1 -0.1 +0.4
phage Bas19 -0.1 N.D. +0.3 +0.3 -0.2
phage Bas39 +0.2 N.D. +0.1 +0.0 +0.1
carbon source D-Glucose +0.1 N.D. +0.3 -0.1 +0.1
phage RB68 -0.3 N.D. +0.4 +0.3 +0.1
phage Bas39 +0.3 N.D. +0.2 +0.1 -0.0
phage K20 -0.1 N.D. +0.2 +0.2 +0.2
phage K20 -0.1 N.D. +0.4 +0.1 +0.3
carbon source Sodium-DL-Lactate +0.2 N.D. +0.1 +0.0 +0.5
phage RB23 +0.0 N.D. +0.6 +0.2 +0.1
remove
HEPCGN_04970
plot
remove
HEPCGN_04975
plot
remove
HEPCGN_04980
remove
HEPCGN_04985
plot
remove
HEPCGN_04995
plot