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Fitness for 5 genes in
Escherichia coli ECOR38
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500 nt
yoaA and tsaB are separated by 57 nucleotides
tsaB and yeaY are separated by 38 nucleotides
yeaY and fadD are separated by 138 nucleotides
fadD and rnd are separated by 81 nucleotides
HEPCGN_04970: yoaA - putative ATP-dependent DNA helicase YoaA, at 869,568 to 871,478
yoaA
HEPCGN_04975: tsaB - tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB, at 871,536 to 872,231
tsaB
HEPCGN_04980: yeaY - Slp family lipoprotein YeaY, at 872,270 to 872,851
yeaY
HEPCGN_04985: fadD - long-chain-fatty-acid--CoA ligase FadD, at 872,990 to 874,741
fadD
HEPCGN_04995: rnd - ribonuclease D, at 874,823 to 875,938
rnd
Group
Condition
HEPCGN
_04970
HEPCGN
_04975
HEPCGN
_04980
HEPCGN
_04985
HEPCGN
_04995
yoaA
tsaB
yeaY
fadD
rnd
phage
Phi92
-0.2
N.D.
-0.1
-0.2
-1.7
phage
Phi92
-0.4
N.D.
-0.1
+0.2
-1.8
carbon source
L-Arabinose
-0.2
N.D.
-0.2
-0.4
+0.2
phage
TP7
+0.1
N.D.
-0.2
+0.3
-0.6
carbon source
Sodium-DL-Lactate
-0.0
N.D.
-0.1
-0.4
+0.1
phage
Bas48
+0.1
N.D.
+0.3
-0.0
-0.8
phage
Bas55
-0.2
N.D.
+0.3
-0.2
-0.2
no phage control
Control_ECOR38
-0.4
N.D.
-0.1
-0.0
+0.3
carbon source
Casamino-acids
-0.1
N.D.
+0.0
-0.1
+0.1
carbon source
Casamino-acids
+0.0
N.D.
-0.1
+0.0
+0.1
phage
Bas48
-0.2
N.D.
+0.3
+0.3
-0.2
phage
Bas19
-0.2
N.D.
-0.4
+0.4
+0.4
phage
Bas38
+0.1
N.D.
-0.1
-0.0
+0.2
phage
TP7
-0.5
N.D.
+0.6
+0.2
-0.0
no phage control
Control_ECOR38
+0.3
N.D.
-0.1
+0.0
+0.0
phage
RB23
+0.1
N.D.
+0.4
+0.0
-0.3
phage
Bas51
+0.1
N.D.
-0.1
+0.1
+0.2
phage
Bas55
-0.2
N.D.
+0.5
+0.2
-0.2
phage
Bas38
-0.0
N.D.
+0.2
+0.1
+0.1
carbon source
L-Arabinose
-0.0
N.D.
+0.1
-0.1
+0.4
phage
Bas19
-0.1
N.D.
+0.3
+0.3
-0.2
phage
Bas39
+0.2
N.D.
+0.1
+0.0
+0.1
carbon source
D-Glucose
+0.1
N.D.
+0.3
-0.1
+0.1
phage
RB68
-0.3
N.D.
+0.4
+0.3
+0.1
phage
Bas39
+0.3
N.D.
+0.2
+0.1
-0.0
phage
K20
-0.1
N.D.
+0.2
+0.2
+0.2
phage
K20
-0.1
N.D.
+0.4
+0.1
+0.3
carbon source
Sodium-DL-Lactate
+0.2
N.D.
+0.1
+0.0
+0.5
phage
RB23
+0.0
N.D.
+0.6
+0.2
+0.1
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