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Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECOR38
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Top 29 experiments (either direction), sorted by average fitness
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500 nt
yebV and rsmF are separated by 117 nucleotides
rsmF and yebT are separated by 73 nucleotides
yebT and yebS overlap by 32 nucleotides
yebS and msrC are separated by 75 nucleotides
HEPCGN_04835: yebV - Uncharacterized protein YebV, at 840,787 to 841,023
yebV
HEPCGN_04840: rsmF - 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF, at 841,141 to 842,586
rsmF
HEPCGN_04845: yebT - lipid-binding membrane homeostasis protein YebT, at 842,660 to 845,293
yebT
HEPCGN_04850: yebS - membrane integrity lipid transport subunit YebS, at 845,262 to 846,545
yebS
HEPCGN_04855: msrC - L-methionine (R)-S-oxide reductase, at 846,621 to 847,172
msrC
Group
Condition
HEPCGN
_04835
HEPCGN
_04840
HEPCGN
_04845
HEPCGN
_04850
HEPCGN
_04855
yebV
rsmF
yebT
yebS
msrC
phage
TP7
-1.5
-0.3
+0.1
-0.1
-0.8
phage
RB23
-1.3
+0.3
+0.2
+0.1
-0.7
phage
Bas55
-1.0
-0.1
+0.1
+0.2
-0.6
carbon source
Sodium-DL-Lactate
-0.8
-0.2
-0.1
+0.1
+0.0
phage
TP7
-0.8
+0.2
-0.1
-0.3
+0.1
no phage control
Control_ECOR38
-0.2
+0.1
+0.0
-0.1
-0.4
phage
Bas48
-0.1
+0.4
+0.1
-0.1
-0.8
phage
Phi92
-0.9
+0.7
-0.4
+0.4
-0.2
carbon source
D-Glucose
-0.1
-0.3
-0.2
+0.1
+0.1
phage
RB68
+0.0
-0.0
-0.0
+0.2
-0.4
phage
RB23
-0.9
+0.8
+0.2
-0.0
-0.3
phage
Bas51
-0.4
+0.2
+0.2
-0.1
-0.1
phage
K20
+0.2
+0.1
-0.0
-0.0
-0.4
phage
Bas19
+0.5
-0.5
+0.0
+0.0
-0.0
phage
Bas39
+0.0
-0.0
+0.1
-0.1
-0.1
carbon source
L-Arabinose
+0.4
-0.2
+0.0
-0.2
-0.0
no phage control
Control_ECOR38
-0.1
+0.2
+0.0
-0.0
-0.1
phage
Phi92
-0.2
+0.4
-0.2
+0.1
-0.0
phage
Bas39
+0.0
+0.0
-0.0
+0.1
-0.0
phage
Bas48
+0.6
-0.2
+0.1
-0.1
-0.2
carbon source
Casamino-acids
+0.4
-0.2
+0.0
+0.1
-0.0
carbon source
Sodium-DL-Lactate
-0.0
-0.1
+0.1
+0.1
+0.1
phage
Bas55
-0.4
+0.2
+0.1
+0.2
+0.1
phage
Bas19
+0.0
+0.3
+0.3
+0.1
-0.3
phage
Bas38
+0.5
+0.1
+0.1
-0.0
-0.1
carbon source
Casamino-acids
+0.4
+0.2
-0.1
+0.1
+0.3
phage
Bas38
+0.6
+0.0
+0.2
+0.1
-0.0
phage
K20
+0.8
-0.3
+0.2
+0.2
+0.0
carbon source
L-Arabinose
+0.8
+0.2
-0.1
+0.2
+0.2
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