Fitness for 5 genes in Escherichia coli ECOR38

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500 ntptrB and exoX overlap by 4 nucleotidesexoX and yobB are separated by 23 nucleotidesyobB and holE are separated by 101 nucleotidesholE and yobA are separated by 138 nucleotides HEPCGN_04780: ptrB - oligopeptidase B, at 833,966 to 836,026 ptrB HEPCGN_04785: exoX - exodeoxyribonuclease X, at 836,023 to 836,685 exoX HEPCGN_04790: yobB - Uncharacterized protein YobB, at 836,709 to 837,365 yobB HEPCGN_04795: holE - DNA polymerase III subunit theta, at 837,467 to 837,697 holE HEPCGN_04800: yobA - CopC domain-containing protein YobA, at 837,836 to 838,210 yobA
Group Condition HEPCGN_04780 HEPCGN_04785 HEPCGN_04790 HEPCGN_04795 HEPCGN_04800
ptrB exoX yobB holE yobA
phage Phi92 -0.3 +0.0 +0.2 -0.4 -0.6
phage Bas19 -0.1 -0.0 -0.1 +0.1 -0.6
carbon source L-Arabinose -0.0 +0.1 +0.1 -0.4 -0.2
carbon source L-Arabinose +0.0 +0.3 -0.3 -0.5 +0.0
carbon source Sodium-DL-Lactate +0.1 -0.2 -0.0 +0.0 -0.2
phage TP7 -0.3 -0.2 -0.4 +0.0 +0.6
phage K20 -0.2 +0.0 -0.0 +0.0 -0.1
phage K20 +0.2 -0.0 -0.1 -0.1 -0.1
phage Bas48 +0.3 -0.0 +0.1 +0.0 -0.4
phage Bas19 -0.0 +0.1 -0.4 +0.2 +0.2
phage Bas55 -0.0 +0.2 +0.1 +0.3 -0.5
no phage control Control_ECOR38 +0.0 -0.1 +0.3 -0.2 +0.2
carbon source D-Glucose +0.0 +0.1 +0.2 +0.1 -0.2
phage Bas39 +0.0 +0.1 +0.2 -0.2 +0.2
carbon source Casamino-acids -0.0 -0.0 +0.2 +0.4 -0.2
phage RB23 +0.0 +0.3 -0.0 -0.1 +0.2
phage Bas55 -0.2 +0.1 -0.0 -0.0 +0.5
phage Bas39 +0.2 +0.1 +0.2 -0.2 +0.2
phage Bas51 -0.0 +0.1 +0.4 -0.1 +0.1
phage Bas48 +0.1 -0.4 +0.1 +0.1 +0.5
phage RB68 +0.0 +0.1 +0.1 +0.3 -0.0
no phage control Control_ECOR38 +0.0 -0.1 -0.1 +0.6 +0.3
carbon source Casamino-acids -0.0 +0.1 +0.3 +0.3 +0.1
phage RB23 -0.1 +0.0 +0.2 -0.1 +0.8
phage Bas38 +0.2 +0.1 +0.2 +0.3 +0.0
carbon source Sodium-DL-Lactate +0.0 +0.1 +0.3 +0.4 +0.0
phage Bas38 +0.2 -0.0 +0.2 +0.2 +0.3
phage Phi92 +0.1 +0.3 -0.1 +0.3 +0.5
phage TP7 +0.0 +0.2 +0.0 +0.7 +0.5
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