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Cofit
Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECOR38
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500 nt
cheR and cheB are separated by 2 nucleotides
cheB and cheY are separated by 14 nucleotides
cheY and cheZ are separated by 10 nucleotides
cheZ and flhB are separated by 208 nucleotides
HEPCGN_04565: cheR - protein-glutamate O-methyltransferase CheR, at 794,425 to 795,285
cheR
HEPCGN_04570: cheB - protein-glutamate methylesterase/protein glutamine deamidase, at 795,288 to 796,337
cheB
HEPCGN_04575: cheY - chemotaxis regulatory protein CheY, at 796,352 to 796,741
cheY
HEPCGN_04580: cheZ - protein phosphatase CheZ, at 796,752 to 797,396
cheZ
HEPCGN_04585: flhB - flagellar biosynthesis protein FlhB, at 797,605 to 798,753
flhB
Group
Condition
HEPCGN
_04565
HEPCGN
_04570
HEPCGN
_04575
HEPCGN
_04580
HEPCGN
_04585
cheR
cheB
cheY
cheZ
flhB
carbon source
L-Arabinose
+0.2
-0.3
-1.6
-0.3
-0.0
phage
RB23
-0.2
-0.1
-0.5
-0.3
-0.6
phage
RB68
-0.1
-0.0
-0.3
-0.3
-0.6
phage
Bas39
+0.3
-0.1
-0.6
-0.1
-0.5
phage
Bas55
-0.6
+0.1
+0.1
-0.1
-0.4
phage
Bas55
-0.4
-0.1
-0.3
-0.0
-0.1
carbon source
D-Glucose
-0.0
-0.1
-0.5
-0.1
-0.1
phage
Phi92
-0.1
-0.2
-0.3
+0.2
-0.4
phage
Bas38
-0.1
-0.1
-0.1
-0.2
-0.3
phage
Bas39
+0.1
-0.2
-0.2
-0.4
+0.1
phage
Bas38
+0.3
-0.1
-0.7
+0.0
-0.1
phage
Bas19
+0.1
-0.5
-0.0
-0.2
+0.1
carbon source
Casamino-acids
+0.3
-0.0
-0.1
-0.5
+0.0
phage
Bas51
+0.2
-0.0
-0.1
-0.0
-0.2
no phage control
Control_ECOR38
+0.3
+0.0
-0.2
-0.1
-0.2
phage
TP7
-0.5
+0.0
+0.5
-0.0
-0.2
no phage control
Control_ECOR38
+0.2
-0.1
+0.1
-0.1
-0.3
phage
Phi92
+0.0
+0.3
-0.3
+0.4
-0.6
carbon source
Casamino-acids
+0.1
+0.2
+0.2
-0.1
-0.3
carbon source
Sodium-DL-Lactate
-0.2
-0.3
-0.2
+0.0
+0.7
carbon source
Sodium-DL-Lactate
+0.1
-0.2
-0.1
+0.2
-0.0
carbon source
L-Arabinose
-0.0
+0.3
-0.2
-0.0
+0.2
phage
TP7
+0.4
-0.1
+0.5
-0.0
-0.4
phage
Bas19
+0.1
-0.0
+0.4
+0.1
-0.3
phage
K20
+0.3
+0.0
+0.0
-0.1
+0.1
phage
K20
+0.4
+0.2
-0.2
+0.1
-0.2
phage
Bas48
-0.1
-0.0
+0.5
+0.1
-0.0
phage
RB23
+0.2
-0.0
-0.4
+0.6
+0.3
phage
Bas48
+0.1
+0.3
+0.6
-0.1
+0.0
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