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Cofit
Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECOR38
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Top 29 experiments (either direction), sorted by average fitness
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500 nt
HEPCGN_04425 and HEPCGN_04430 are separated by 89 nucleotides
HEPCGN_04430 and HEPCGN_04435 are separated by 15 nucleotides
HEPCGN_04435 and HEPCGN_04440 are separated by 29 nucleotides
HEPCGN_04440 and xerD are separated by 131 nucleotides
HEPCGN_04425: HEPCGN_04425 - hypothetical protein, at 771,294 to 771,431
_04425
HEPCGN_04430: HEPCGN_04430 - transcriptional regulator, at 771,521 to 771,925
_04430
HEPCGN_04435: HEPCGN_04435 - Putative transmembrane protein, at 771,941 to 772,591
_04435
HEPCGN_04440: HEPCGN_04440 - DUF2511 domain-containing protein, at 772,621 to 772,968
_04440
HEPCGN_04445: xerD - integrase, at 773,100 to 773,975
xerD
Group
Condition
HEPCGN
_04425
HEPCGN
_04430
HEPCGN
_04435
HEPCGN
_04440
HEPCGN
_04445
xerD
phage
RB23
N.D.
N.D.
-0.0
-0.4
-0.3
phage
Bas55
N.D.
N.D.
-0.0
-0.4
-0.2
no phage control
Control_ECOR38
N.D.
N.D.
-0.1
-0.4
-0.1
phage
Bas55
N.D.
N.D.
+0.3
-0.7
+0.0
carbon source
D-Glucose
N.D.
N.D.
-0.5
-0.0
+0.2
carbon source
L-Arabinose
N.D.
N.D.
-0.3
+0.0
-0.1
phage
Bas19
N.D.
N.D.
+0.0
-0.5
+0.2
phage
Bas48
N.D.
N.D.
+0.2
-0.3
-0.2
phage
Phi92
N.D.
N.D.
-0.2
-0.1
+0.1
phage
Bas38
N.D.
N.D.
-0.1
-0.3
+0.2
carbon source
Casamino-acids
N.D.
N.D.
-0.1
-0.1
-0.0
phage
K20
N.D.
N.D.
+0.5
-0.6
+0.0
phage
Bas39
N.D.
N.D.
-0.1
+0.1
-0.1
phage
TP7
N.D.
N.D.
-0.3
-0.1
+0.4
phage
Bas38
N.D.
N.D.
+0.2
-0.1
-0.1
carbon source
Sodium-DL-Lactate
N.D.
N.D.
-0.1
+0.3
-0.1
carbon source
Sodium-DL-Lactate
N.D.
N.D.
+0.0
+0.1
-0.0
phage
RB23
N.D.
N.D.
+0.3
-0.3
+0.1
phage
K20
N.D.
N.D.
+0.4
-0.1
-0.2
phage
Phi92
N.D.
N.D.
+0.1
-0.3
+0.5
phage
Bas19
N.D.
N.D.
+0.2
-0.1
+0.1
phage
Bas39
N.D.
N.D.
+0.1
+0.2
-0.0
no phage control
Control_ECOR38
N.D.
N.D.
+0.0
+0.5
-0.2
phage
Bas51
N.D.
N.D.
+0.2
+0.2
+0.0
carbon source
Casamino-acids
N.D.
N.D.
+0.2
+0.2
+0.0
phage
Bas48
N.D.
N.D.
-0.1
+0.2
+0.4
carbon source
L-Arabinose
N.D.
N.D.
+0.1
-0.0
+0.4
phage
RB68
N.D.
N.D.
+0.6
-0.3
+0.2
phage
TP7
N.D.
N.D.
+0.8
-0.3
+0.4
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