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Cofit
Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECOR38
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Top 29 experiments (either direction), sorted by average fitness
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500 nt
HEPCGN_04265 and HEPCGN_04270 are separated by 3 nucleotides
HEPCGN_04270 and HEPCGN_04275 overlap by 4 nucleotides
HEPCGN_04275 and HEPCGN_04280 overlap by 4 nucleotides
HEPCGN_04280 and HEPCGN_04285 overlap by 17 nucleotides
HEPCGN_04265: HEPCGN_04265 - baseplate assembly protein, at 748,848 to 749,744
_04265
HEPCGN_04270: HEPCGN_04270 - baseplate assembly protein, at 749,748 to 750,098
_04270
HEPCGN_04275: HEPCGN_04275 - phage baseplate assembly protein V, at 750,095 to 750,676
_04275
HEPCGN_04280: HEPCGN_04280 - phage virion morphogenesis protein, at 750,673 to 751,317
_04280
HEPCGN_04285: HEPCGN_04285 - phage tail protein, at 751,301 to 751,768
_04285
Group
Condition
HEPCGN
_04265
HEPCGN
_04270
HEPCGN
_04275
HEPCGN
_04280
HEPCGN
_04285
phage
Bas19
-0.4
N.D.
N.D.
-1.2
+0.3
carbon source
Casamino-acids
-0.1
N.D.
N.D.
-1.4
+0.2
phage
Phi92
-0.6
N.D.
N.D.
-0.0
-0.3
phage
K20
-0.4
N.D.
N.D.
+0.0
-0.5
carbon source
D-Glucose
-0.7
N.D.
N.D.
-0.0
+0.0
phage
Bas48
-0.4
N.D.
N.D.
+0.0
-0.3
phage
Phi92
-0.3
N.D.
N.D.
-0.2
-0.1
phage
Bas51
-0.1
N.D.
N.D.
-0.1
-0.4
phage
Bas38
-0.1
N.D.
N.D.
+0.3
-0.5
phage
Bas48
-0.5
N.D.
N.D.
+0.4
-0.1
carbon source
Sodium-DL-Lactate
-0.1
N.D.
N.D.
-0.1
+0.0
carbon source
L-Arabinose
-0.0
N.D.
N.D.
-0.3
+0.2
phage
RB23
+0.3
N.D.
N.D.
-0.3
-0.2
phage
TP7
-0.0
N.D.
N.D.
+0.3
-0.3
phage
Bas39
-0.2
N.D.
N.D.
+0.4
-0.3
carbon source
Casamino-acids
+0.0
N.D.
N.D.
-0.0
-0.0
phage
K20
-0.3
N.D.
N.D.
+0.1
+0.2
phage
TP7
-0.1
N.D.
N.D.
+1.0
-0.8
phage
Bas39
+0.4
N.D.
N.D.
-0.2
-0.0
phage
Bas19
+0.0
N.D.
N.D.
+0.3
-0.1
no phage control
Control_ECOR38
+0.4
N.D.
N.D.
+0.1
-0.2
phage
RB23
+0.2
N.D.
N.D.
+0.3
-0.2
phage
Bas55
-0.2
N.D.
N.D.
+1.0
-0.4
phage
Bas38
+0.4
N.D.
N.D.
+0.0
-0.0
phage
RB68
+0.1
N.D.
N.D.
+0.6
-0.0
no phage control
Control_ECOR38
+0.0
N.D.
N.D.
+0.7
+0.0
carbon source
Sodium-DL-Lactate
+0.2
N.D.
N.D.
+0.2
+0.3
phage
Bas55
-0.1
N.D.
N.D.
+0.2
+0.7
carbon source
L-Arabinose
+0.0
N.D.
N.D.
+1.0
+0.6
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